Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.2094
GLN -7
0.1144
GLN -6
0.1177
MET -5
0.0688
GLY -4
0.2094
ARG -3
0.0320
GLY -2
0.0899
SER -1
0.0433
MET 0
0.0133
MET 0
0.0132
CYS 1
0.0072
CYS 1
0.0073
ASP 2
0.0122
ALA 3
0.0167
PHE 4
0.0108
VAL 5
0.0055
GLY 6
0.0059
THR 7
0.0043
TRP 8
0.0027
LYS 9
0.0019
LEU 10
0.0050
VAL 11
0.0080
SER 12
0.0092
SER 13
0.0049
GLU 14
0.0032
GLU 14
0.0029
ASN 15
0.0043
ASN 15
0.0043
PHE 16
0.0024
ASP 17
0.0022
ASP 18
0.0037
TYR 19
0.0044
MET 20
0.0045
LYS 21
0.0094
GLU 22
0.0085
VAL 23
0.0072
GLY 24
0.0077
VAL 25
0.0069
GLY 26
0.0134
PHE 27
0.0145
ALA 28
0.0131
THR 29
0.0043
ARG 30
0.0040
LYS 31
0.0034
VAL 32
0.0035
VAL 32
0.0035
ALA 33
0.0049
GLY 34
0.0062
MET 35
0.0080
ALA 36
0.0066
LYS 37
0.0060
PRO 38
0.0051
ASN 39
0.0015
MET 40
0.0037
ILE 41
0.0129
ILE 42
0.0114
SER 43
0.0184
VAL 44
0.0178
ASN 45
0.0152
GLY 46
0.0337
ASP 47
0.0349
VAL 48
0.0086
ILE 49
0.0113
THR 50
0.0208
ILE 51
0.0146
LYS 52
0.0088
SER 53
0.0019
GLU 54
0.0032
SER 55
0.0036
SER 55
0.0040
THR 56
0.0078
THR 56
0.0096
PHE 57
0.0098
PHE 57
0.0098
LYS 58
0.0062
LYS 58
0.0057
ASN 59
0.0079
THR 60
0.0191
GLU 61
0.0067
ILE 62
0.0079
SER 63
0.0093
PHE 64
0.0041
ILE 65
0.0111
LEU 66
0.0105
GLY 67
0.0092
GLN 68
0.0161
GLU 69
0.0211
PHE 70
0.0115
ASP 71
0.0103
GLU 72
0.0099
VAL 73
0.0023
VAL 73
0.0019
THR 74
0.0014
ALA 75
0.0097
ASP 76
0.0043
ASP 77
0.0046
ARG 78
0.0031
LYS 79
0.0040
VAL 80
0.0075
LYS 81
0.0088
SER 82
0.0058
THR 83
0.0051
ILE 84
0.0039
THR 85
0.0165
LEU 86
0.0129
LEU 86
0.0125
ASP 87
0.0165
ASP 87
0.0164
GLY 88
0.0192
GLY 88
0.0199
GLY 89
0.0105
GLY 89
0.0099
VAL 90
0.0094
LEU 91
0.0107
VAL 92
0.0111
HIS 93
0.0029
VAL 94
0.0044
GLN 95
0.0071
LYS 96
0.0065
TRP 97
0.0056
ASP 98
0.0217
ASP 98
0.0198
GLY 99
0.0096
LYS 100
0.0124
SER 101
0.0056
THR 102
0.0037
THR 103
0.0080
ILE 104
0.0054
LYS 105
0.0031
ARG 106
0.0067
LYS 107
0.0066
ARG 108
0.0066
GLU 109
0.0064
ASP 110
0.0030
ASP 111
0.0075
LYS 112
0.0069
LEU 113
0.0059
LEU 113
0.0059
VAL 114
0.0084
VAL 115
0.0023
GLU 116
0.0077
GLU 116
0.0076
CYS 117
0.0096
VAL 118
0.0101
MET 119
0.0064
MET 119
0.0055
LYS 120
0.0036
LYS 120
0.0042
GLY 121
0.0017
GLY 121
0.0019
VAL 122
0.0037
THR 123
0.0095
SER 124
0.0061
THR 125
0.0038
ARG 126
0.0050
VAL 127
0.0078
TYR 128
0.0054
GLU 129
0.0064
GLU 129
0.0063
ARG 130
0.0036
ALA 131
0.0064
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.