CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***

<R2> analysis for 2602031635481411610

---  normal mode 35  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1072
GLN -70.0096
GLN -60.0166
MET -50.0160
GLY -40.0119
ARG -30.0047
GLY -20.0451
SER -10.0378
MET 00.0452
MET 00.0460
CYS 10.0130
CYS 10.0124
ASP 20.0046
ALA 30.0202
PHE 40.0133
VAL 50.0105
GLY 60.0136
THR 70.0191
TRP 80.0145
LYS 90.0213
LEU 100.0182
VAL 110.0226
SER 120.0188
SER 130.0182
GLU 140.0182
GLU 140.0185
ASN 150.0177
ASN 150.0177
PHE 160.0173
ASP 170.0149
ASP 180.0148
TYR 190.0104
MET 200.0130
LYS 210.0078
GLU 220.0167
VAL 230.0112
GLY 240.0100
VAL 250.0182
GLY 260.0215
PHE 270.0302
ALA 280.0231
THR 290.0164
ARG 300.0229
LYS 310.0338
VAL 320.0354
VAL 320.0360
ALA 330.0301
GLY 340.0411
MET 350.0705
ALA 360.0296
LYS 370.0195
PRO 380.0146
ASN 390.0127
MET 400.0092
ILE 410.0037
ILE 420.0068
SER 430.0073
VAL 440.0140
ASN 450.0291
GLY 460.0222
ASP 470.0264
VAL 480.0231
ILE 490.0198
THR 500.0140
ILE 510.0114
LYS 520.0096
SER 530.0105
GLU 540.0054
SER 550.0056
SER 550.0079
THR 560.0219
THR 560.0246
PHE 570.0145
PHE 570.0149
LYS 580.0076
LYS 580.0073
ASN 590.0159
THR 600.0271
GLU 610.0186
ILE 620.0141
SER 630.0199
PHE 640.0244
ILE 650.0282
LEU 660.0268
GLY 670.0173
GLN 680.0144
GLU 690.0242
PHE 700.0176
ASP 710.0267
GLU 720.0149
VAL 730.0290
VAL 730.0282
THR 740.0276
ALA 750.0322
ASP 760.0345
ASP 770.0426
ARG 780.0268
LYS 790.0283
VAL 800.0063
LYS 810.0186
SER 820.0145
THR 830.0169
ILE 840.0194
THR 850.0221
LEU 860.0224
LEU 860.0213
ASP 870.0255
ASP 870.0247
GLY 880.0378
GLY 880.0385
GLY 890.0238
GLY 890.0235
VAL 900.0090
LEU 910.0066
VAL 920.0108
HIS 930.0185
VAL 940.0205
GLN 950.0167
LYS 960.0163
TRP 970.0135
ASP 980.0454
ASP 980.0455
GLY 990.0075
LYS 1000.0273
SER 1010.0204
THR 1020.0164
THR 1030.0174
ILE 1040.0183
LYS 1050.0179
ARG 1060.0145
LYS 1070.0165
ARG 1080.0248
GLU 1090.0338
ASP 1100.1072
ASP 1110.0349
LYS 1120.0201
LEU 1130.0132
LEU 1130.0131
VAL 1140.0126
VAL 1150.0235
GLU 1160.0239
GLU 1160.0239
CYS 1170.0261
VAL 1180.0209
MET 1190.0159
MET 1190.0189
LYS 1200.0415
LYS 1200.0429
GLY 1210.0529
GLY 1210.0525
VAL 1220.0187
THR 1230.0166
SER 1240.0190
THR 1250.0200
ARG 1260.0177
VAL 1270.0141
TYR 1280.0124
GLU 1290.0216
GLU 1290.0208
ARG 1300.0190
ALA 1310.0344

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.