Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  LIPID BINDING PROTEIN 11-OCT-10 3P6D  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0626
GLN -7
0.0042
GLN -6
0.0139
MET -5
0.0087
GLY -4
0.0165
ARG -3
0.0138
GLY -2
0.0462
SER -1
0.0128
MET 0
0.0345
MET 0
0.0348
CYS 1
0.0061
CYS 1
0.0068
ASP 2
0.0185
ALA 3
0.0210
PHE 4
0.0162
VAL 5
0.0208
GLY 6
0.0222
THR 7
0.0194
TRP 8
0.0144
LYS 9
0.0160
LEU 10
0.0214
VAL 11
0.0225
SER 12
0.0283
SER 13
0.0121
GLU 14
0.0107
GLU 14
0.0108
ASN 15
0.0092
ASN 15
0.0093
PHE 16
0.0128
ASP 17
0.0154
ASP 18
0.0058
TYR 19
0.0051
MET 20
0.0120
LYS 21
0.0128
GLU 22
0.0288
VAL 23
0.0184
GLY 24
0.0258
VAL 25
0.0203
GLY 26
0.0323
PHE 27
0.0325
ALA 28
0.0070
THR 29
0.0192
ARG 30
0.0174
LYS 31
0.0234
VAL 32
0.0273
VAL 32
0.0274
ALA 33
0.0195
GLY 34
0.0186
MET 35
0.0204
ALA 36
0.0371
LYS 37
0.0468
PRO 38
0.0344
ASN 39
0.0249
MET 40
0.0173
ILE 41
0.0135
ILE 42
0.0176
SER 43
0.0170
VAL 44
0.0102
ASN 45
0.0151
GLY 46
0.0277
ASP 47
0.0302
VAL 48
0.0260
ILE 49
0.0136
THR 50
0.0145
ILE 51
0.0118
LYS 52
0.0040
SER 53
0.0192
GLU 54
0.0306
SER 55
0.0361
SER 55
0.0418
THR 56
0.0445
THR 56
0.0488
PHE 57
0.0133
PHE 57
0.0185
LYS 58
0.0240
LYS 58
0.0253
ASN 59
0.0322
THR 60
0.0175
GLU 61
0.0066
ILE 62
0.0017
SER 63
0.0109
PHE 64
0.0103
ILE 65
0.0110
LEU 66
0.0067
GLY 67
0.0167
GLN 68
0.0199
GLU 69
0.0173
PHE 70
0.0091
ASP 71
0.0181
GLU 72
0.0141
VAL 73
0.0336
VAL 73
0.0321
THR 74
0.0077
ALA 75
0.0141
ASP 76
0.0411
ASP 77
0.0626
ARG 78
0.0313
LYS 79
0.0266
VAL 80
0.0158
LYS 81
0.0197
SER 82
0.0107
THR 83
0.0121
ILE 84
0.0148
THR 85
0.0133
LEU 86
0.0160
LEU 86
0.0172
ASP 87
0.0314
ASP 87
0.0325
GLY 88
0.0483
GLY 88
0.0494
GLY 89
0.0332
GLY 89
0.0319
VAL 90
0.0160
LEU 91
0.0054
VAL 92
0.0134
HIS 93
0.0189
VAL 94
0.0153
GLN 95
0.0159
LYS 96
0.0174
TRP 97
0.0105
ASP 98
0.0455
ASP 98
0.0442
GLY 99
0.0580
LYS 100
0.0251
SER 101
0.0194
THR 102
0.0136
THR 103
0.0140
ILE 104
0.0159
LYS 105
0.0146
ARG 106
0.0121
LYS 107
0.0119
ARG 108
0.0111
GLU 109
0.0224
ASP 110
0.0520
ASP 111
0.0247
LYS 112
0.0132
LEU 113
0.0092
LEU 113
0.0092
VAL 114
0.0104
VAL 115
0.0121
GLU 116
0.0108
GLU 116
0.0108
CYS 117
0.0087
VAL 118
0.0048
MET 119
0.0161
MET 119
0.0164
LYS 120
0.0453
LYS 120
0.0502
GLY 121
0.0580
GLY 121
0.0572
VAL 122
0.0265
THR 123
0.0123
SER 124
0.0032
THR 125
0.0097
ARG 126
0.0128
VAL 127
0.0131
TYR 128
0.0095
GLU 129
0.0140
GLU 129
0.0139
ARG 130
0.0204
ALA 131
0.0208
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.