CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***    ***

Normal Mode Analysis for ID 2602041025561708195

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4802
mode 8 1.03 0.3752
mode 9 1.28 0.5634
mode 10 1.71 0.1658
mode 11 1.77 0.3246
mode 12 1.81 0.3542
mode 13 1.92 0.3646
mode 14 1.99 0.2525
mode 15 2.07 0.1933
mode 16 2.14 0.1427
mode 17 2.21 0.2178
mode 18 2.31 0.4503
mode 19 2.34 0.3195
mode 20 2.47 0.2783
mode 21 2.50 0.0907
mode 22 2.59 0.2302
mode 23 2.63 0.1592
mode 24 2.78 0.4805
mode 25 2.80 0.3717
mode 26 2.87 0.6262
mode 27 2.98 0.5043
mode 28 3.03 0.1458
mode 29 3.08 0.2428
mode 30 3.13 0.1772
mode 31 3.17 0.3912
mode 32 3.20 0.3670
mode 33 3.21 0.2425
mode 34 3.28 0.0884
mode 35 3.37 0.2507
mode 36 3.38 0.4873
mode 37 3.40 0.4689
mode 38 3.42 0.4298
mode 39 3.45 0.2375
mode 40 3.54 0.2250
mode 41 3.58 0.3475
mode 42 3.61 0.3837
mode 43 3.64 0.4845
mode 44 3.72 0.3582
mode 45 3.77 0.1933
mode 46 3.80 0.4079
mode 47 3.83 0.5229
mode 48 3.87 0.3884
mode 49 3.95 0.5150
mode 50 3.96 0.3818
mode 51 3.99 0.5107
mode 52 4.07 0.3544
mode 53 4.14 0.4491
mode 54 4.18 0.1901
mode 55 4.20 0.4613
mode 56 4.24 0.5988
mode 57 4.27 0.4087
mode 58 4.31 0.4530
mode 59 4.34 0.2458
mode 60 4.36 0.4738
mode 61 4.40 0.4062
mode 62 4.43 0.4803
mode 63 4.47 0.4033
mode 64 4.51 0.3146
mode 65 4.54 0.4270
mode 66 4.56 0.3985
mode 67 4.57 0.2749
mode 68 4.60 0.3658
mode 69 4.62 0.3458
mode 70 4.68 0.4732
mode 71 4.75 0.3401
mode 72 4.76 0.3805
mode 73 4.82 0.3748
mode 74 4.84 0.4113
mode 75 4.87 0.4256
mode 76 4.88 0.3911
mode 77 4.91 0.1643
mode 78 4.92 0.0976
mode 79 4.93 0.3281
mode 80 4.95 0.2399
mode 81 4.96 0.3546
mode 82 4.99 0.3343
mode 83 5.03 0.4254
mode 84 5.08 0.3584
mode 85 5.10 0.4663
mode 86 5.14 0.3832
mode 87 5.15 0.3682
mode 88 5.17 0.3523
mode 89 5.20 0.3195
mode 90 5.22 0.2895
mode 91 5.23 0.3964
mode 92 5.29 0.2400
mode 93 5.31 0.4042
mode 94 5.36 0.3330
mode 95 5.38 0.3404
mode 96 5.41 0.3726
mode 97 5.44 0.2643
mode 98 5.46 0.4590
mode 99 5.47 0.4039
mode 100 5.52 0.5503
mode 101 5.54 0.4834
mode 102 5.55 0.3794
mode 103 5.56 0.4085
mode 104 5.59 0.5018
mode 105 5.63 0.4268
mode 106 5.64 0.3299

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.