CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  FXIa WT  ***

B-factor analysis for ID 2602050841352585888

Overall B-factor prediction

Correlation= 0.257 for 238 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   ILE     16      0.0075     17.9386     15.6500
    10 CA   VAL     17      0.0096     18.2062     19.9200
    17 CA   GLY     18      0.0151     18.8773     19.7700
    21 CA   GLY     19      0.0131     18.6311     21.0000
    25 CA   THR     20      0.0263     20.2512     26.1000
    32 CA   ALA     21      0.0192     19.3878     24.2400
    37 CA   SER     22      0.0127     18.5835     22.9200
    43 CA   VAL     23      0.0235     19.9117     25.0300
    50 CA   ARG     24      0.0203     19.5206     20.8500
    61 CA   GLY     25      0.0197     19.4467     19.7800
    65 CA   GLU     26      0.0110     18.3726     19.4000
    74 CA   TRP     27      0.0079     17.9928     15.2000
    88 CA   PRO     28      0.0078     17.9856     14.6300
    95 CA   TRP     29      0.0063     17.7991     15.0400
   109 CA   GLN     30      0.0040     17.5111     12.3000
   118 CA   VAL     31      0.0038     17.4929     10.4600
   125 CA   THR     32      0.0050     17.6340     13.7700
   132 CA   LEU     33      0.0048     17.6144     17.5200
   140 CA   HIS     34      0.0087     18.0955     14.9300
   150 CA   THR     35      0.0129     18.6117     20.5900
   157 CA   THR     36      0.0269     20.3265     26.6400
   164 CA   SER     36      0.0575     24.0849     37.4400
   170 CA   PRO     36      0.0886     27.9036     39.5800
   177 CA   THR     37      0.0736     26.0689     33.2900
   184 CA   GLN     38      0.0251     20.1079     25.5400
   193 CA   ARG     39      0.0272     20.3645     20.2100
   204 CA   HIS     40      0.0075     17.9427     15.3000
   214 CA   LEU     41      0.0087     18.0936     15.4600
   222 CA   CYS     42      0.0048     17.6176     14.9900
   228 CA   GLY     43      0.0043     17.5567     11.3400
   232 CA   GLY     44      0.0041     17.5327     12.0800
   236 CA   SER     45      0.0040     17.5097     14.9000
   242 CA   ILE     46      0.0058     17.7400     13.3300
   250 CA   ILE     47      0.0067     17.8476     11.5300
   258 CA   GLY     48      0.0156     18.9364     13.2600
   262 CA   ASN     49      0.0165     19.0555     15.6600
   270 CA   GLN     50      0.0113     18.4089     14.7300
   279 CA   TRP     51      0.0089     18.1109     16.9600
   293 CA   ILE     52      0.0045     17.5720     11.1400
   301 CA   LEU     53      0.0042     17.5390     11.5400
   309 CA   THR     54      0.0048     17.6088     12.1400
   316 CA   ALA     55      0.0053     17.6793     12.7600
   321 CA   ALA     56      0.0086     18.0770     11.5300
   326 CA   HIS     57      0.0092     18.1516     12.0400
   336 CA   CYS     58      0.0138     18.7184     15.1800
   342 CA   PHE     58      0.0156     18.9347     12.0000
   353 CA   TYR     58      0.0402     21.9590     19.5700
   365 CA   GLY     59      0.0626     24.7094     28.5100
   369 CA   VAL     60      0.0298     20.6823     28.7400
   376 CA   GLU     61      0.0571     24.0421     34.0700
   385 CA   SER     62      0.0302     20.7324     27.6600
   391 CA   PRO     63      0.0185     19.2912     22.0200
   398 CA   LYS     64      0.0226     19.7982     23.6400
   407 CA   ILE     65      0.0167     19.0791     19.5000
   415 CA   LEU     65      0.0101     18.2702     15.7300
   423 CA   ARG     65      0.0097     18.2099     17.6900
   434 CA   VAL     66      0.0062     17.7902     15.4200
   441 CA   TYR     67      0.0065     17.8197     13.4700
   453 CA   SER     68      0.0077     17.9753     12.7800
   459 CA   GLY     69      0.0091     18.1354     17.1200
   463 CA   ILE     70      0.0090     18.1271     17.9600
   471 CA   LEU     71      0.0099     18.2395     16.7900
   479 CA   ASN     72      0.0127     18.5875     15.5100
   487 CA   GLN     73      0.0112     18.3991     16.8700
   496 CA   SER     74      0.0361     21.4620     21.7300
   502 CA   GLU     75      0.0254     20.1416     19.5200
   511 CA   ILE     76      0.0214     19.6476     19.2000
   519 CA   LYS     77      0.0486     22.9921     21.9000
   528 CA   GLU     78      0.0965     28.8821     24.4600
   533 CA   ASP     79      0.1058     30.0248     19.9300
   541 CA   THR     80      0.0332     21.0990     18.0000
   548 CA   SER     81      0.0406     22.0149     19.1200
   554 CA   PHE     82      0.0119     18.4888     17.8700
   565 CA   PHE     83      0.0113     18.4132     16.3000
   576 CA   GLY     84      0.0124     18.5498     14.0200
   580 CA   VAL     85      0.0107     18.3411     18.1900
   587 CA   GLN     86      0.0183     19.2723     19.5100
   596 CA   GLU     87      0.0175     19.1727     18.3100
   605 CA   ILE     88      0.0100     18.2493     16.4500
   613 CA   ILE     89      0.0093     18.1606     13.8700
   621 CA   ILE     90      0.0100     18.2491     12.6900
   629 CA   HIS     91      0.0098     18.2241     12.5600
   639 CA   ASP     92      0.0407     22.0287     17.3600
   647 CA   GLN     93      0.0337     21.1614     14.6800
   656 CA   TYR     94      0.0178     19.2079     13.4300
   668 CA   LYS     95      0.0327     21.0432     14.9200
   677 CA   MET     96      0.0240     19.9733     12.5100
   685 CA   ALA     97      0.0162     19.0120     14.1500
   690 CA   GLU     98      0.0176     19.1796     13.6700
   699 CA   SER     99      0.0207     19.5605     16.0200
   705 CA   GLY    100      0.0133     18.6576     14.7300
   709 CA   TYR    101      0.0110     18.3776     10.7800
   721 CA   ASP    102      0.0063     17.7988     12.5300
   729 CA   ILE    103      0.0059     17.7499     11.0300
   737 CA   ALA    104      0.0061     17.7725     10.1400
   742 CA   LEU    105      0.0058     17.7317     12.1800
   750 CA   LEU    106      0.0067     17.8494     12.5000
   758 CA   LYS    107      0.0091     18.1452     15.6100
   767 CA   LEU    108      0.0105     18.3156     14.6300
   775 CA   GLU    109      0.0182     19.2581     19.2100
   784 CA   THR    110      0.0224     19.7803     19.9000
   791 CA   THR    111      0.0233     19.8867     22.6200
   798 CA   VAL    112      0.0180     19.2288     18.2300
   805 CA   GLY    113      0.0302     20.7338     15.9600
   809 CA   TYR    114      0.0283     20.5009     15.5100
   821 CA   GLY    115      0.0407     22.0239     17.2100
   825 CA   ASP    116      0.0566     23.9801     18.4200
   833 CA   SER    117      0.0252     20.1183     16.1500
   839 CA   GLN    118      0.0129     18.6066     18.7700
   848 CA   ARG    119      0.0128     18.6017     19.4500
   859 CA   PRO    120      0.0088     18.0983     15.9000
   866 CA   ILE    121      0.0071     17.8949     14.6100
   874 CA   CYS    122      0.0098     18.2235     23.3700
   880 CA   LEU    123      0.0088     18.1077     23.4800
   888 CA   PRO    124      0.0130     18.6214     31.3400
   895 CA   SER    125      0.0256     20.1619     46.8900
   901 CA   LYS    126      0.0548     23.7588     60.0600
   906 CA   GLY    127      0.0679     25.3685     68.3100
   910 CA   ASP    128      0.0331     21.0868     73.8500
   918 CA   ARG    129      0.0374     21.6144     72.3700
   929 CA   ASN    130      0.0986     29.1301     68.6600
   934 CA   VAL    131      0.0565     23.9617     61.3600
   941 CA   ILE    132      0.0594     24.3195     52.9100
   949 CA   TYR    133      0.0211     19.6175     38.6000
   961 CA   THR    134      0.0295     20.6443     32.0700
   968 CA   ASP    135      0.0160     18.9911     26.0300
   976 CA   CYS    136      0.0072     17.9110     18.9700
   982 CA   TRP    137      0.0066     17.8369     17.2500
   996 CA   VAL    138      0.0046     17.5864     14.4400
  1003 CA   THR    139      0.0045     17.5703     13.0800
  1010 CA   GLY    140      0.0058     17.7345     12.6800
  1014 CA   TRP    141      0.0061     17.7745     16.5300
  1028 CA   GLY    142      0.0122     18.5183     19.6700
  1032 CA   TYR    143      0.0135     18.6808     19.4100
  1044 CA   ARG    145      0.0202     19.4991     23.9400
  1055 CA   LYS    146      0.0301     20.7251     30.2100
  1064 CA   LEU    147      0.0382     21.7211     37.7700
  1072 CA   ARG    148      0.0557     23.8683     35.7000
  1077 CA   ASP    149      0.0393     21.8569     26.7100
  1085 CA   LYS    150      0.0387     21.7805     25.0200
  1094 CA   ILE    151      0.0150     18.8625     19.5500
  1102 CA   GLN    152      0.0143     18.7802     17.5400
  1111 CA   ASN    153      0.0162     19.0131     20.4200
  1119 CA   THR    154      0.0125     18.5641     17.5800
  1126 CA   LEU    155      0.0074     17.9298     16.8100
  1134 CA   GLN    156      0.0075     17.9469     16.6400
  1143 CA   LYS    157      0.0077     17.9718     16.0100
  1152 CA   ALA    158      0.0084     18.0545     15.7300
  1157 CA   LYS    159      0.0098     18.2274     18.2900
  1166 CA   ILE    160      0.0084     18.0518     22.3400
  1174 CA   PRO    161      0.0114     18.4277     17.6200
  1181 CA   LEU    162      0.0101     18.2621     20.1300
  1189 CA   VAL    163      0.0183     19.2708     24.3400
  1196 CA   THR    164      0.0316     20.9005     21.1100
  1203 CA   ASN    165      0.0228     19.8204     21.8600
  1211 CA   GLU    166      0.0360     21.4447     24.3600
  1220 CA   GLU    167      0.0230     19.8488     21.6800
  1229 CA   CYS    168      0.0141     18.7535     18.5600
  1235 CA   GLN    168      0.0182     19.2627     20.9400
  1244 CA   LYS    169      0.0288     20.5564     21.9600
  1253 CA   ARG    170      0.0188     19.3335     19.2300
  1264 CA   TYR    171      0.0207     19.5689     18.2100
  1276 CA   ARG    172      0.0523     23.4488     26.4800
  1287 CA   GLY    173      0.0556     23.8522     24.4800
  1291 CA   HIS    174      0.0303     20.7503     19.5900
  1301 CA   LYS    175      0.0319     20.9434     24.4900
  1310 CA   ILE    176      0.0169     19.0969     22.0200
  1318 CA   THR    177      0.0232     19.8785     21.2100
  1325 CA   HIS    178      0.0245     20.0332     28.0300
  1335 CA   LYS    179      0.0092     18.1571     17.5900
  1344 CA   MET    180      0.0083     18.0476     13.9400
  1352 CA   ILE    181      0.0061     17.7717     16.1600
  1360 CA   CYS    182      0.0063     17.7998     15.0700
  1366 CA   ALA    183      0.0095     18.1913     15.8900
  1371 CA   GLY    184      0.0082     18.0333     19.0000
  1375 CA   TYR    184      0.0125     18.5573     21.0900
  1387 CA   ARG    184      0.0184     19.2838     23.3500
  1398 CA   GLU    185      0.0337     21.1595     21.8700
  1403 CA   GLY    186      0.0192     19.3860     19.9200
  1407 CA   GLY    187      0.0180     19.2318     22.5400
  1411 CA   LYS    188      0.0121     18.5142     20.0700
  1420 CA   ASP    189      0.0074     17.9320     17.5100
  1428 CA   ALA    190      0.0073     17.9212     14.6800
  1433 CA   CYS    191      0.0119     18.4853     16.7700
  1439 CA   LYS    192      0.0174     19.1553     14.2300
  1448 CA   GLY    193      0.0078     17.9764     14.0600
  1452 CA   ASP    194      0.0056     17.7134     13.2200
  1460 CA   SER    195      0.0048     17.6177     12.8900
  1466 CA   GLY    196      0.0044     17.5655     10.1500
  1470 CA   GLY    197      0.0038     17.4879     10.8500
  1474 CA   PRO    198      0.0037     17.4719     10.8800
  1481 CA   LEU    199      0.0043     17.5555     14.5800
  1489 CA   SER    200      0.0044     17.5643     16.6100
  1495 CA   CYS    201      0.0090     18.1284     18.8200
  1501 CA   LYS    202      0.0140     18.7445     28.0600
  1510 CA   HIS    203      0.0249     20.0843     38.3500
  1520 CA   ASN    204      0.0633     24.7947     39.9500
  1528 CA   GLU    205      0.0688     25.4769     38.1800
  1537 CA   VAL    206      0.0386     21.7635     27.6700
  1544 CA   TRP    207      0.0094     18.1796     22.5300
  1558 CA   HIS    208      0.0091     18.1385     18.6400
  1568 CA   LEU    209      0.0048     17.6139     13.7800
  1576 CA   VAL    210      0.0048     17.6111     15.4600
  1583 CA   GLY    211      0.0041     17.5213     13.5700
  1587 CA   ILE    212      0.0038     17.4863     11.3400
  1595 CA   THR    213      0.0043     17.5469     13.5100
  1602 CA   SER    214      0.0049     17.6311     13.4300
  1608 CA   TRP    215      0.0110     18.3782     13.9400
  1622 CA   GLY    216      0.0105     18.3095     15.2100
  1626 CA   GLU    217      0.0213     19.6357     14.8200
  1635 CA   GLY    218      0.0267     20.3037     16.9500
  1639 CA   CYS    219      0.0166     19.0648     17.8700
  1645 CA   ALA    220      0.0160     18.9939     21.8700
  1650 CA   GLN    221      0.0222     19.7454     18.6700
  1659 CA   ARG    222      0.0261     20.2260     21.6600
  1670 CA   GLU    223      0.0197     19.4411     20.3400
  1679 CA   ARG    224      0.0129     18.6130     17.4400
  1690 CA   PRO    225      0.0073     17.9197     15.6600
  1697 CA   GLY    226      0.0069     17.8678     14.1700
  1701 CA   VAL    227      0.0050     17.6359     11.2400
  1708 CA   TYR    228      0.0049     17.6195     11.2200
  1720 CA   THR    229      0.0051     17.6463     13.0700
  1727 CA   ASN    230      0.0063     17.7958     10.6700
  1735 CA   VAL    231      0.0072     17.9058     13.3300
  1742 CA   VAL    232      0.0094     18.1760     18.3500
  1749 CA   GLU    233      0.0112     18.4020     17.0100
  1758 CA   TYR    234      0.0099     18.2344     13.4200
  1770 CA   VAL    235      0.0141     18.7591     15.4700
  1777 CA   ASP    236      0.0280     20.4618     15.7000
  1785 CA   TRP    237      0.0119     18.4799     12.3300
  1799 CA   ILE    238      0.0105     18.3169     12.6900
  1807 CA   LEU    239      0.0291     20.6016     15.0100
  1815 CA   GLU    240      0.0313     20.8641     13.8400
  1824 CA   LYS    241      0.0171     19.1240     17.5900
  1833 CA   THR    242      0.0214     19.6550     20.0300
  1840 CA   GLN    243      0.0768     26.4564     23.0400
  1849 CA   ALA    244      0.1557     36.1526     25.8400
  1854 CA   VAL    245      1.2630    172.1526     38.9200

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.