CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 18-AUG-21 7PHT  ***

Normal Mode Analysis for ID 2602051127572645536

Conformational change expected to be analysed

%Projmod-Wn> Eigenvector 39 Norm= 0.9999 %Projmod-Wn> Eigenvector 51 Norm= 1.0001 %Projmod-Wn> Eigenvector 69 Norm= 0.9999 %Projmod-Wn> Eigenvector 79 Norm= 0.9999 %Projmod-Wn> Eigenvector 94 Norm= 1.0001 %Projmod-Wn> Eigenvector 97 Norm= 0.9999 %Projmod-Wn> Eigenvector 104 Norm= 0.9999

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.6520 NaN 0.0000
mode 8 1.20 0.5801 NaN 0.0000
mode 9 1.59 0.5567 NaN 0.0000
mode 10 2.44 0.6058 NaN 0.0000
mode 11 2.70 0.6388 NaN 0.0000
mode 12 3.19 0.5444 NaN 0.0000
mode 13 3.26 0.6071 NaN 0.0000
mode 14 4.08 0.0247 NaN 0.0000
mode 15 4.21 0.5114 NaN 0.0000
mode 16 4.39 0.5728 NaN 0.0000
mode 17 4.61 0.0348 NaN 0.0000
mode 18 4.99 0.0101 NaN 0.0000
mode 19 5.02 0.6093 NaN 0.0000
mode 20 5.20 0.0054 NaN 0.0000
mode 21 5.33 0.0216 NaN 0.0000
mode 22 5.42 0.0654 NaN 0.0000
mode 23 5.50 0.0117 NaN 0.0000
mode 24 5.55 0.2447 NaN 0.0000
mode 25 5.63 0.0110 NaN 0.0000
mode 26 5.76 0.0276 NaN 0.0000
mode 27 5.79 0.0657 NaN 0.0000
mode 28 5.81 0.0157 NaN 0.0000
mode 29 5.89 0.0207 NaN 0.0000
mode 30 5.92 0.0181 NaN 0.0000
mode 31 5.97 0.0786 NaN 0.0000
mode 32 6.00 0.0677 NaN 0.0000
mode 33 6.09 0.0310 NaN 0.0000
mode 34 6.13 0.0273 NaN 0.0000
mode 35 6.17 0.0130 NaN 0.0000
mode 36 6.18 0.0206 NaN 0.0000
mode 37 6.31 0.0146 NaN 0.0000
mode 38 6.36 0.0138 NaN 0.0000
mode 39 6.40 0.0216 NaN 0.0000
mode 40 6.42 0.0127 NaN 0.0000
mode 41 6.52 0.0187 NaN 0.0000
mode 42 6.63 0.0392 NaN 0.0000
mode 43 6.70 0.0607 NaN 0.0000
mode 44 6.80 0.1570 NaN 0.0000
mode 45 6.84 0.0210 NaN 0.0000
mode 46 6.93 0.0173 NaN 0.0000
mode 47 6.96 0.0095 NaN 0.0000
mode 48 6.99 0.0215 NaN 0.0000
mode 49 7.05 0.0415 NaN 0.0000
mode 50 7.08 0.0503 NaN 0.0000
mode 51 7.12 0.0265 NaN 0.0000
mode 52 7.13 0.0212 NaN 0.0000
mode 53 7.17 0.1487 NaN 0.0000
mode 54 7.20 0.0516 NaN 0.0000
mode 55 7.23 0.0223 NaN 0.0000
mode 56 7.28 0.1394 NaN 0.0000
mode 57 7.31 0.0891 NaN 0.0000
mode 58 7.37 0.0728 NaN 0.0000
mode 59 7.39 0.0181 NaN 0.0000
mode 60 7.42 0.0153 NaN 0.0000
mode 61 7.43 0.0156 NaN 0.0000
mode 62 7.44 0.0467 NaN 0.0000
mode 63 7.45 0.0346 NaN 0.0000
mode 64 7.47 0.0365 NaN 0.0000
mode 65 7.49 0.0214 NaN 0.0000
mode 66 7.50 0.0184 NaN 0.0000
mode 67 7.58 0.0307 NaN 0.0000
mode 68 7.59 0.0307 NaN 0.0000
mode 69 7.59 0.0107 NaN 0.0000
mode 70 7.63 0.0828 NaN 0.0000
mode 71 7.68 0.0186 NaN 0.0000
mode 72 7.69 0.0060 NaN 0.0000
mode 73 7.72 0.0620 NaN 0.0000
mode 74 7.78 0.0268 NaN 0.0000
mode 75 7.79 0.0383 NaN 0.0000
mode 76 7.85 0.0169 NaN 0.0000
mode 77 7.87 0.0754 NaN 0.0000
mode 78 7.93 0.0462 NaN 0.0000
mode 79 7.94 0.0210 NaN 0.0000
mode 80 7.95 0.1163 NaN 0.0000
mode 81 7.99 0.1052 NaN 0.0000
mode 82 8.04 0.0145 NaN 0.0000
mode 83 8.09 0.0457 NaN 0.0000
mode 84 8.10 0.0238 NaN 0.0000
mode 85 8.12 0.0253 NaN 0.0000
mode 86 8.14 0.0282 NaN 0.0000
mode 87 8.19 0.0114 NaN 0.0000
mode 88 8.22 0.0354 NaN 0.0000
mode 89 8.24 0.0547 NaN 0.0000
mode 90 8.28 0.0395 NaN 0.0000
mode 91 8.30 0.0225 NaN 0.0000
mode 92 8.33 0.0469 NaN 0.0000
mode 93 8.37 0.0213 NaN 0.0000
mode 94 8.44 0.0140 NaN 0.0000
mode 95 8.45 0.0208 NaN 0.0000
mode 96 8.50 0.0403 NaN 0.0000
mode 97 8.51 0.0098 NaN 0.0000
mode 98 8.52 0.0258 NaN 0.0000
mode 99 8.54 0.0711 NaN 0.0000
mode 100 8.56 0.0590 NaN 0.0000
mode 101 8.61 0.0139 NaN 0.0000
mode 102 8.62 0.0729 NaN 0.0000
mode 103 8.63 0.0869 NaN 0.0000
mode 104 8.65 0.0338 NaN 0.0000
mode 105 8.65 0.0409 NaN 0.0000
mode 106 8.66 0.1975 NaN 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.