CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  FXIa G216A  ***

Normal Mode Analysis for ID 2602051414582688829

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.3435
mode 8 1.06 0.3086
mode 9 1.14 0.0878
mode 10 1.22 0.0402
mode 11 1.28 0.2398
mode 12 1.37 0.1558
mode 13 1.43 0.2567
mode 14 1.44 0.1472
mode 15 1.50 0.0962
mode 16 1.56 0.1908
mode 17 1.57 0.1238
mode 18 1.59 0.2002
mode 19 1.65 0.2029
mode 20 1.69 0.1480
mode 21 1.70 0.1915
mode 22 1.73 0.1931
mode 23 1.77 0.1334
mode 24 1.79 0.1633
mode 25 1.81 0.0272
mode 26 1.81 0.0917
mode 27 1.83 0.1616
mode 28 1.83 0.1547
mode 29 1.85 0.2285
mode 30 1.86 0.0924
mode 31 1.87 0.2679
mode 32 1.88 0.1317
mode 33 1.91 0.1654
mode 34 1.95 0.4064
mode 35 1.97 0.2377
mode 36 1.97 0.2101
mode 37 2.00 0.1273
mode 38 2.02 0.2588
mode 39 2.02 0.2118
mode 40 2.05 0.1325
mode 41 2.05 0.2376
mode 42 2.08 0.2476
mode 43 2.09 0.1524
mode 44 2.11 0.3153
mode 45 2.12 0.1216
mode 46 2.14 0.1688
mode 47 2.15 0.1330
mode 48 2.17 0.1913
mode 49 2.18 0.3919
mode 50 2.19 0.3142
mode 51 2.20 0.1745
mode 52 2.21 0.2148
mode 53 2.23 0.1417
mode 54 2.25 0.2578
mode 55 2.27 0.2926
mode 56 2.27 0.3354
mode 57 2.28 0.2064
mode 58 2.29 0.2029
mode 59 2.30 0.2262
mode 60 2.31 0.1891
mode 61 2.33 0.2042
mode 62 2.34 0.2585
mode 63 2.36 0.2612
mode 64 2.37 0.1451
mode 65 2.38 0.2720
mode 66 2.39 0.2099
mode 67 2.40 0.2512
mode 68 2.41 0.2373
mode 69 2.41 0.1300
mode 70 2.43 0.1542
mode 71 2.44 0.0802
mode 72 2.45 0.1608
mode 73 2.46 0.1924
mode 74 2.47 0.2683
mode 75 2.50 0.2576
mode 76 2.50 0.0622
mode 77 2.51 0.1381
mode 78 2.52 0.2801
mode 79 2.53 0.2820
mode 80 2.54 0.2285
mode 81 2.55 0.2922
mode 82 2.56 0.2800
mode 83 2.57 0.2491
mode 84 2.57 0.2002
mode 85 2.59 0.1329
mode 86 2.60 0.1146
mode 87 2.60 0.1058
mode 88 2.61 0.2254
mode 89 2.61 0.2839
mode 90 2.62 0.2372
mode 91 2.63 0.1850
mode 92 2.64 0.2389
mode 93 2.66 0.1926
mode 94 2.66 0.1967
mode 95 2.66 0.2813
mode 96 2.67 0.2695
mode 97 2.68 0.2380
mode 98 2.69 0.2492
mode 99 2.70 0.1992
mode 100 2.70 0.2531
mode 101 2.72 0.1462
mode 102 2.72 0.2956
mode 103 2.73 0.2819
mode 104 2.73 0.2505
mode 105 2.74 0.2672
mode 106 2.74 0.2411

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.