CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025650

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1833
PRO 10.0175
GLN 20.0286
ILE 30.0175
THR 40.0134
LEU 50.0131
TRP 60.0138
LYS 70.0242
ARG 80.0150
PRO 90.0139
LEU 100.0234
VAL 110.0250
THR 120.0098
ILE 130.0112
ARG 140.0053
ILE 150.0155
GLY 160.0481
GLY 170.0387
GLN 180.0148
LEU 190.0211
LEU 190.0210
LYS 200.0164
GLU 210.0194
GLU 210.0194
ALA 220.0173
LEU 230.0150
LEU 240.0141
ASP 250.0081
THR 260.0051
GLY 270.0073
ALA 280.0041
ASP 290.0105
ASP 300.0106
THR 310.0101
VAL 320.0102
LEU 330.0087
GLU 340.0230
GLU 350.0275
MET 360.0098
ASN 370.0123
LEU 380.0143
PRO 390.0303
GLY 400.0397
LYS 410.0204
TRP 420.0155
LYS 430.0024
PRO 440.0121
LYS 450.0117
MET 460.0212
ILE 470.0167
ILE 470.0167
GLY 480.0202
GLY 490.0105
ILE 500.0120
GLY 510.0101
GLY 520.0102
PHE 530.0192
ILE 540.0110
LYS 550.0202
VAL 560.0085
ARG 570.0045
GLN 580.0069
TYR 590.0141
ASP 600.0153
GLN 610.0246
ILE 620.0114
PRO 630.0164
VAL 640.0101
GLU 650.0119
ILE 660.0114
CYS 670.0173
GLY 680.0237
HIS 690.0172
LYS 700.0252
ALA 710.0128
ILE 720.0190
GLY 730.0231
THR 740.0150
VAL 750.0103
LEU 760.0060
VAL 770.0074
GLY 780.0132
PRO 790.0135
THR 800.0203
PRO 810.0237
VAL 820.0129
VAL 820.0131
ASN 830.0031
ILE 840.0099
ILE 850.0102
GLY 860.0073
ARG 870.0022
ASN 880.0072
LEU 890.0039
LEU 900.0061
THR 910.0062
GLN 920.0130
ILE 930.0128
GLY 940.0120
CYS 950.0106
CYS 950.0106
THR 960.0129
LEU 970.0097
ASN 980.0166
PHE 990.0314
PRO 10.0202
GLN 20.0059
ILE 30.0155
THR 40.0116
LEU 50.0054
TRP 60.0046
LYS 70.0068
ARG 80.0072
PRO 90.0067
LEU 100.0067
VAL 110.0117
THR 120.0108
ILE 130.0017
ARG 140.0113
ILE 150.0183
GLY 160.0115
GLY 170.0292
GLN 180.0084
LEU 190.0086
LYS 200.0102
GLU 210.0099
ALA 220.0063
LEU 230.0087
LEU 240.0086
ASP 250.0108
THR 260.0072
GLY 270.0067
ALA 280.0063
ASP 290.0111
ASP 300.0036
THR 310.0047
VAL 320.0098
VAL 320.0098
LEU 330.0116
GLU 340.0143
GLU 350.0200
MET 360.0074
ASN 370.0163
LEU 380.0234
PRO 390.0282
GLY 400.1833
LYS 410.1284
TRP 420.0275
LYS 430.0334
PRO 440.0190
LYS 450.0102
MET 460.0071
MET 460.0071
ILE 470.0083
GLY 480.0121
GLY 490.0144
ILE 500.0063
GLY 510.0101
GLY 520.0146
PHE 530.0143
ILE 540.0084
LYS 550.0039
VAL 560.0031
ARG 570.0071
GLN 580.0133
TYR 590.0095
ASP 600.0033
GLN 610.0147
ILE 620.0152
PRO 630.0252
VAL 640.0086
GLU 650.0106
GLU 650.0114
ILE 660.0120
CYS 670.0291
GLY 680.0267
HIS 690.0062
LYS 700.0167
ALA 710.0161
ILE 720.0074
GLY 730.0158
THR 740.0092
VAL 750.0091
LEU 760.0041
VAL 770.0070
GLY 780.0135
PRO 790.0153
THR 800.0122
PRO 810.0127
VAL 820.0078
VAL 820.0077
ASN 830.0076
ILE 840.0032
ILE 850.0051
GLY 860.0060
ARG 870.0096
ASN 880.0091
LEU 890.0084
LEU 900.0054
THR 910.0056
GLN 920.0149
ILE 930.0104
GLY 940.0223
CYS 950.0166
THR 960.0201
LEU 970.0118
ASN 980.0118
PHE 990.0127

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.