CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025650

---  normal mode 49  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1057
PRO 10.0292
GLN 20.0444
ILE 30.0433
THR 40.0395
LEU 50.0121
TRP 60.0411
LYS 70.0546
ARG 80.0427
PRO 90.0394
LEU 100.0284
VAL 110.0091
THR 120.0099
ILE 130.0093
ARG 140.0084
ILE 150.0114
GLY 160.0208
GLY 170.0124
GLN 180.0116
LEU 190.0068
LEU 190.0069
LYS 200.0126
GLU 210.0076
GLU 210.0076
ALA 220.0115
LEU 230.0223
LEU 240.0201
ASP 250.0153
THR 260.0113
GLY 270.0147
ALA 280.0152
ASP 290.0176
ASP 300.0140
THR 310.0095
VAL 320.0063
LEU 330.0080
GLU 340.0130
GLU 350.0171
MET 360.0163
ASN 370.0135
LEU 380.0227
PRO 390.0742
GLY 400.1057
LYS 410.0605
TRP 420.0209
LYS 430.0027
PRO 440.0406
LYS 450.0262
MET 460.0105
ILE 470.0102
ILE 470.0102
GLY 480.0238
GLY 490.0308
ILE 500.0225
GLY 510.0150
GLY 520.0262
PHE 530.0214
ILE 540.0122
LYS 550.0224
VAL 560.0108
ARG 570.0073
GLN 580.0048
TYR 590.0147
ASP 600.0254
GLN 610.0378
ILE 620.0213
PRO 630.0226
VAL 640.0124
GLU 650.0066
ILE 660.0118
CYS 670.0193
GLY 680.0410
HIS 690.0261
LYS 700.0164
ALA 710.0159
ILE 720.0255
GLY 730.0230
THR 740.0159
VAL 750.0072
LEU 760.0050
VAL 770.0102
GLY 780.0078
PRO 790.0099
THR 800.0073
PRO 810.0062
VAL 820.0079
VAL 820.0080
ASN 830.0051
ILE 840.0111
ILE 850.0158
GLY 860.0164
ARG 870.0145
ASN 880.0114
LEU 890.0117
LEU 900.0102
THR 910.0071
GLN 920.0113
ILE 930.0158
GLY 940.0224
CYS 950.0167
CYS 950.0163
THR 960.0213
LEU 970.0176
ASN 980.0052
PHE 990.0157
PRO 10.0255
GLN 20.0314
ILE 30.0373
THR 40.0401
LEU 50.0234
TRP 60.0273
LYS 70.0303
ARG 80.0260
PRO 90.0211
LEU 100.0130
VAL 110.0113
THR 120.0169
ILE 130.0126
ARG 140.0070
ILE 150.0133
GLY 160.0364
GLY 170.0603
GLN 180.0338
LEU 190.0077
LYS 200.0115
GLU 210.0114
ALA 220.0055
LEU 230.0099
LEU 240.0035
ASP 250.0111
THR 260.0181
GLY 270.0204
ALA 280.0182
ASP 290.0264
ASP 300.0140
THR 310.0089
VAL 320.0046
VAL 320.0046
LEU 330.0056
GLU 340.0106
GLU 350.0142
MET 360.0125
ASN 370.0161
LEU 380.0131
PRO 390.0263
GLY 400.0291
LYS 410.0269
TRP 420.0176
LYS 430.0138
PRO 440.0142
LYS 450.0094
MET 460.0084
MET 460.0082
ILE 470.0103
GLY 480.0181
GLY 490.0209
ILE 500.0108
GLY 510.0072
GLY 520.0082
PHE 530.0047
ILE 540.0111
LYS 550.0047
VAL 560.0039
ARG 570.0075
GLN 580.0124
TYR 590.0081
ASP 600.0194
GLN 610.0171
ILE 620.0112
PRO 630.0137
VAL 640.0144
GLU 650.0188
GLU 650.0177
ILE 660.0186
CYS 670.0187
GLY 680.0184
HIS 690.0208
LYS 700.0221
ALA 710.0177
ILE 720.0158
GLY 730.0155
THR 740.0114
VAL 750.0053
LEU 760.0052
VAL 770.0035
GLY 780.0037
PRO 790.0080
THR 800.0057
PRO 810.0126
VAL 820.0127
VAL 820.0127
ASN 830.0081
ILE 840.0079
ILE 850.0076
GLY 860.0134
ARG 870.0195
ASN 880.0160
LEU 890.0114
LEU 900.0087
THR 910.0086
GLN 920.0026
ILE 930.0175
GLY 940.0267
CYS 950.0219
THR 960.0284
LEU 970.0230
ASN 980.0151
PHE 990.0118

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.