CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025650

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0711
PRO 10.0140
GLN 20.0163
ILE 30.0111
THR 40.0030
LEU 50.0185
TRP 60.0433
LYS 70.0540
ARG 80.0281
PRO 90.0208
LEU 100.0205
VAL 110.0105
THR 120.0107
ILE 130.0146
ARG 140.0228
ILE 150.0109
GLY 160.0083
GLY 170.0200
GLN 180.0178
LEU 190.0171
LEU 190.0170
LYS 200.0133
GLU 210.0153
GLU 210.0158
ALA 220.0048
LEU 230.0069
LEU 240.0089
ASP 250.0134
THR 260.0116
GLY 270.0116
ALA 280.0155
ASP 290.0142
ASP 300.0069
THR 310.0064
VAL 320.0055
LEU 330.0059
GLU 340.0105
GLU 350.0096
MET 360.0053
ASN 370.0100
LEU 380.0124
PRO 390.0511
GLY 400.0676
LYS 410.0524
TRP 420.0209
LYS 430.0054
PRO 440.0268
LYS 450.0166
MET 460.0247
ILE 470.0174
ILE 470.0174
GLY 480.0071
GLY 490.0363
ILE 500.0465
GLY 510.0438
GLY 520.0397
PHE 530.0068
ILE 540.0142
LYS 550.0205
VAL 560.0147
ARG 570.0123
GLN 580.0084
TYR 590.0137
ASP 600.0182
GLN 610.0208
ILE 620.0158
PRO 630.0095
VAL 640.0129
GLU 650.0204
ILE 660.0125
CYS 670.0069
GLY 680.0136
HIS 690.0139
LYS 700.0148
ALA 710.0119
ILE 720.0106
GLY 730.0128
THR 740.0088
VAL 750.0087
LEU 760.0089
VAL 770.0109
GLY 780.0118
PRO 790.0143
THR 800.0103
PRO 810.0179
VAL 820.0105
VAL 820.0105
ASN 830.0080
ILE 840.0033
ILE 850.0110
GLY 860.0145
ARG 870.0118
ASN 880.0092
LEU 890.0112
LEU 900.0129
THR 910.0178
GLN 920.0158
ILE 930.0165
GLY 940.0192
CYS 950.0178
CYS 950.0179
THR 960.0127
LEU 970.0041
ASN 980.0062
PHE 990.0087
PRO 10.0169
GLN 20.0201
ILE 30.0079
THR 40.0108
LEU 50.0071
TRP 60.0177
LYS 70.0171
ARG 80.0067
PRO 90.0045
LEU 100.0131
VAL 110.0171
THR 120.0191
ILE 130.0150
ARG 140.0134
ILE 150.0113
GLY 160.0191
GLY 170.0383
GLN 180.0405
LEU 190.0534
LYS 200.0323
GLU 210.0232
ALA 220.0165
LEU 230.0025
LEU 240.0020
ASP 250.0126
THR 260.0133
GLY 270.0155
ALA 280.0224
ASP 290.0301
ASP 300.0196
THR 310.0192
VAL 320.0191
VAL 320.0191
LEU 330.0159
GLU 340.0135
GLU 350.0128
MET 360.0201
ASN 370.0222
LEU 380.0202
PRO 390.0245
GLY 400.0665
LYS 410.0352
TRP 420.0221
LYS 430.0223
PRO 440.0264
LYS 450.0183
MET 460.0144
MET 460.0150
ILE 470.0150
GLY 480.0158
GLY 490.0185
ILE 500.0102
GLY 510.0185
GLY 520.0230
PHE 530.0218
ILE 540.0212
LYS 550.0254
VAL 560.0133
ARG 570.0162
GLN 580.0177
TYR 590.0238
ASP 600.0557
GLN 610.0580
ILE 620.0342
PRO 630.0336
VAL 640.0213
GLU 650.0338
GLU 650.0342
ILE 660.0317
CYS 670.0476
GLY 680.0711
HIS 690.0368
LYS 700.0142
ALA 710.0331
ILE 720.0415
GLY 730.0289
THR 740.0213
VAL 750.0134
LEU 760.0086
VAL 770.0077
GLY 780.0030
PRO 790.0150
THR 800.0107
PRO 810.0170
VAL 820.0079
VAL 820.0078
ASN 830.0164
ILE 840.0179
ILE 850.0082
GLY 860.0224
ARG 870.0256
ASN 880.0199
LEU 890.0236
LEU 900.0192
THR 910.0273
GLN 920.0302
ILE 930.0155
GLY 940.0128
CYS 950.0104
THR 960.0023
LEU 970.0054
ASN 980.0084
PHE 990.0111

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.