CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025650

---  normal mode 78  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0660
PRO 10.0269
GLN 20.0226
ILE 30.0139
THR 40.0056
LEU 50.0089
TRP 60.0268
LYS 70.0188
ARG 80.0238
PRO 90.0148
LEU 100.0113
VAL 110.0123
THR 120.0070
ILE 130.0114
ARG 140.0152
ILE 150.0132
GLY 160.0170
GLY 170.0220
GLN 180.0173
LEU 190.0148
LEU 190.0147
LYS 200.0217
GLU 210.0231
GLU 210.0241
ALA 220.0094
LEU 230.0135
LEU 240.0164
ASP 250.0233
THR 260.0192
GLY 270.0225
ALA 280.0216
ASP 290.0378
ASP 300.0244
THR 310.0136
VAL 320.0173
LEU 330.0184
GLU 340.0265
GLU 350.0340
MET 360.0169
ASN 370.0330
LEU 380.0238
PRO 390.0569
GLY 400.0295
LYS 410.0580
TRP 420.0157
LYS 430.0144
PRO 440.0177
LYS 450.0202
MET 460.0411
ILE 470.0257
ILE 470.0256
GLY 480.0165
GLY 490.0126
ILE 500.0218
GLY 510.0233
GLY 520.0163
PHE 530.0144
ILE 540.0128
LYS 550.0268
VAL 560.0175
ARG 570.0119
GLN 580.0124
TYR 590.0202
ASP 600.0211
GLN 610.0120
ILE 620.0139
PRO 630.0180
VAL 640.0093
GLU 650.0313
ILE 660.0232
CYS 670.0286
GLY 680.0410
HIS 690.0252
LYS 700.0187
ALA 710.0139
ILE 720.0190
GLY 730.0108
THR 740.0168
VAL 750.0123
LEU 760.0040
VAL 770.0042
GLY 780.0136
PRO 790.0269
THR 800.0265
PRO 810.0348
VAL 820.0173
VAL 820.0174
ASN 830.0168
ILE 840.0086
ILE 850.0066
GLY 860.0088
ARG 870.0102
ASN 880.0178
LEU 890.0133
LEU 900.0088
THR 910.0168
GLN 920.0210
ILE 930.0084
GLY 940.0188
CYS 950.0108
CYS 950.0108
THR 960.0074
LEU 970.0100
ASN 980.0116
PHE 990.0129
PRO 10.0328
GLN 20.0337
ILE 30.0167
THR 40.0012
LEU 50.0118
TRP 60.0159
LYS 70.0219
ARG 80.0150
PRO 90.0213
LEU 100.0220
VAL 110.0164
THR 120.0264
ILE 130.0254
ARG 140.0154
ILE 150.0112
GLY 160.0258
GLY 170.0327
GLN 180.0156
LEU 190.0394
LYS 200.0243
GLU 210.0311
ALA 220.0117
LEU 230.0065
LEU 240.0140
ASP 250.0285
THR 260.0264
GLY 270.0403
ALA 280.0383
ASP 290.0660
ASP 300.0205
THR 310.0114
VAL 320.0099
VAL 320.0099
LEU 330.0151
GLU 340.0234
GLU 350.0378
MET 360.0279
ASN 370.0102
LEU 380.0107
PRO 390.0279
GLY 400.0227
LYS 410.0480
TRP 420.0109
LYS 430.0105
PRO 440.0304
LYS 450.0044
MET 460.0134
MET 460.0132
ILE 470.0105
GLY 480.0193
GLY 490.0236
ILE 500.0128
GLY 510.0166
GLY 520.0234
PHE 530.0231
ILE 540.0115
LYS 550.0172
VAL 560.0077
ARG 570.0053
GLN 580.0119
TYR 590.0151
ASP 600.0504
GLN 610.0404
ILE 620.0267
PRO 630.0278
VAL 640.0021
GLU 650.0151
GLU 650.0147
ILE 660.0198
CYS 670.0241
GLY 680.0204
HIS 690.0133
LYS 700.0183
ALA 710.0091
ILE 720.0259
GLY 730.0344
THR 740.0189
VAL 750.0111
LEU 760.0047
VAL 770.0117
GLY 780.0195
PRO 790.0299
THR 800.0218
PRO 810.0280
VAL 820.0179
VAL 820.0180
ASN 830.0130
ILE 840.0067
ILE 850.0067
GLY 860.0109
ARG 870.0067
ASN 880.0224
LEU 890.0130
LEU 900.0087
THR 910.0098
GLN 920.0169
ILE 930.0175
GLY 940.0131
CYS 950.0140
THR 960.0150
LEU 970.0092
ASN 980.0216
PHE 990.0188

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.