CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025651

---  normal mode 38  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0899
PRO 10.0358
GLN 20.0185
ILE 30.0190
THR 40.0267
LEU 50.0144
TRP 60.0164
LYS 70.0267
ARG 80.0296
PRO 90.0136
LEU 100.0194
VAL 110.0104
THR 120.0156
ILE 130.0144
ARG 140.0152
ILE 150.0187
GLY 160.0223
GLY 170.0337
GLN 180.0275
LEU 190.0173
LEU 190.0173
LYS 200.0080
GLU 210.0087
GLU 210.0091
ALA 220.0085
LEU 230.0123
LEU 240.0040
ASP 250.0086
THR 260.0141
GLY 270.0179
ALA 280.0140
ASP 290.0157
ASP 300.0110
THR 310.0086
VAL 320.0059
LEU 330.0096
GLU 340.0114
GLU 350.0193
MET 360.0208
ASN 370.0507
LEU 380.0237
PRO 390.0627
GLY 400.0478
LYS 410.0331
TRP 420.0218
LYS 430.0167
PRO 440.0076
LYS 450.0186
MET 460.0217
ILE 470.0037
ILE 470.0037
GLY 480.0185
GLY 490.0260
ILE 500.0151
GLY 510.0127
GLY 520.0199
PHE 530.0148
ILE 540.0077
LYS 550.0133
VAL 560.0063
ARG 570.0107
GLN 580.0123
TYR 590.0069
ASP 600.0183
GLN 610.0103
ILE 620.0086
PRO 630.0075
VAL 640.0058
GLU 650.0113
ILE 660.0136
CYS 670.0129
GLY 680.0171
HIS 690.0240
LYS 700.0332
ALA 710.0211
ILE 720.0120
GLY 730.0114
THR 740.0094
VAL 750.0097
LEU 760.0083
VAL 770.0111
GLY 780.0107
PRO 790.0115
THR 800.0123
PRO 810.0266
VAL 820.0164
VAL 820.0162
ASN 830.0104
ILE 840.0078
ILE 850.0064
GLY 860.0144
ARG 870.0159
ASN 880.0184
LEU 890.0182
LEU 900.0176
THR 910.0145
GLN 920.0233
ILE 930.0257
GLY 940.0193
CYS 950.0172
CYS 950.0176
THR 960.0087
LEU 970.0045
ASN 980.0057
PHE 990.0062
PRO 10.0314
GLN 20.0288
ILE 30.0198
THR 40.0169
LEU 50.0151
TRP 60.0191
LYS 70.0268
ARG 80.0271
PRO 90.0283
LEU 100.0340
VAL 110.0277
THR 120.0212
ILE 130.0112
ARG 140.0169
ILE 150.0331
GLY 160.0423
GLY 170.0668
GLN 180.0356
LEU 190.0280
LYS 200.0137
GLU 210.0161
ALA 220.0180
LEU 230.0213
LEU 240.0190
ASP 250.0124
THR 260.0075
GLY 270.0118
ALA 280.0128
ASP 290.0170
ASP 300.0112
THR 310.0129
VAL 320.0136
VAL 320.0136
LEU 330.0150
GLU 340.0124
GLU 350.0105
MET 360.0091
ASN 370.0168
LEU 380.0124
PRO 390.0346
GLY 400.0506
LYS 410.0153
TRP 420.0121
LYS 430.0152
PRO 440.0161
LYS 450.0111
MET 460.0128
MET 460.0128
ILE 470.0077
GLY 480.0187
GLY 490.0175
ILE 500.0089
GLY 510.0040
GLY 520.0070
PHE 530.0110
ILE 540.0087
LYS 550.0136
VAL 560.0097
ARG 570.0073
GLN 580.0097
TYR 590.0074
ASP 600.0174
GLN 610.0899
ILE 620.0233
PRO 630.0203
VAL 640.0314
GLU 650.0306
GLU 650.0300
ILE 660.0221
CYS 670.0168
GLY 680.0220
HIS 690.0250
LYS 700.0272
ALA 710.0203
ILE 720.0183
GLY 730.0338
THR 740.0147
VAL 750.0190
LEU 760.0098
VAL 770.0108
GLY 780.0100
PRO 790.0101
THR 800.0118
PRO 810.0132
VAL 820.0128
VAL 820.0129
ASN 830.0125
ILE 840.0125
ILE 850.0118
GLY 860.0079
ARG 870.0058
ASN 880.0084
LEU 890.0133
LEU 900.0039
THR 910.0105
GLN 920.0161
ILE 930.0121
GLY 940.0078
CYS 950.0045
THR 960.0079
LEU 970.0115
ASN 980.0202
PHE 990.0264

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.