CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025651

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1305
PRO 10.0546
GLN 20.0351
ILE 30.0173
THR 40.0166
LEU 50.0141
TRP 60.0230
LYS 70.0237
ARG 80.0243
PRO 90.0192
LEU 100.0212
VAL 110.0152
THR 120.0161
ILE 130.0132
ARG 140.0115
ILE 150.0078
GLY 160.0084
GLY 170.0162
GLN 180.0182
LEU 190.0122
LEU 190.0119
LYS 200.0090
GLU 210.0173
GLU 210.0180
ALA 220.0200
LEU 230.0225
LEU 240.0187
ASP 250.0181
THR 260.0116
GLY 270.0114
ALA 280.0145
ASP 290.0149
ASP 300.0115
THR 310.0094
VAL 320.0043
LEU 330.0050
GLU 340.0153
GLU 350.0266
MET 360.0195
ASN 370.0220
LEU 380.0073
PRO 390.0107
GLY 400.0381
LYS 410.0182
TRP 420.0159
LYS 430.0166
PRO 440.0125
LYS 450.0128
MET 460.0055
ILE 470.0233
ILE 470.0234
GLY 480.0178
GLY 490.0121
ILE 500.0195
GLY 510.0224
GLY 520.0148
PHE 530.0264
ILE 540.0226
LYS 550.0204
VAL 560.0226
ARG 570.0167
GLN 580.0189
TYR 590.0151
ASP 600.0122
GLN 610.0054
ILE 620.0043
PRO 630.0066
VAL 640.0065
GLU 650.0055
ILE 660.0076
CYS 670.0210
GLY 680.0337
HIS 690.0229
LYS 700.0151
ALA 710.0124
ILE 720.0088
GLY 730.0071
THR 740.0076
VAL 750.0086
LEU 760.0148
VAL 770.0181
GLY 780.0210
PRO 790.0178
THR 800.0100
PRO 810.0131
VAL 820.0185
VAL 820.0187
ASN 830.0156
ILE 840.0173
ILE 850.0181
GLY 860.0184
ARG 870.0139
ASN 880.0158
LEU 890.0165
LEU 900.0125
THR 910.0173
GLN 920.0183
ILE 930.0178
GLY 940.0330
CYS 950.0149
CYS 950.0149
THR 960.0182
LEU 970.0143
ASN 980.0180
PHE 990.0054
PRO 10.0134
GLN 20.0255
ILE 30.0148
THR 40.0083
LEU 50.0057
TRP 60.0280
LYS 70.0187
ARG 80.0194
PRO 90.0124
LEU 100.0224
VAL 110.0170
THR 120.0114
ILE 130.0094
ARG 140.0057
ILE 150.0161
GLY 160.0322
GLY 170.0391
GLN 180.0303
LEU 190.0227
LYS 200.0124
GLU 210.0199
ALA 220.0170
LEU 230.0162
LEU 240.0098
ASP 250.0103
THR 260.0129
GLY 270.0138
ALA 280.0069
ASP 290.0137
ASP 300.0096
THR 310.0082
VAL 320.0109
VAL 320.0110
LEU 330.0155
GLU 340.0213
GLU 350.0212
MET 360.0206
ASN 370.0827
LEU 380.0281
PRO 390.0618
GLY 400.1305
LYS 410.0414
TRP 420.0271
LYS 430.0415
PRO 440.0462
LYS 450.0201
MET 460.0276
MET 460.0269
ILE 470.0114
GLY 480.0180
GLY 490.0290
ILE 500.0126
GLY 510.0194
GLY 520.0248
PHE 530.0283
ILE 540.0249
LYS 550.0160
VAL 560.0157
ARG 570.0195
GLN 580.0206
TYR 590.0120
ASP 600.0129
GLN 610.0156
ILE 620.0099
PRO 630.0166
VAL 640.0176
GLU 650.0185
GLU 650.0172
ILE 660.0149
CYS 670.0150
GLY 680.0217
HIS 690.0176
LYS 700.0277
ALA 710.0233
ILE 720.0130
GLY 730.0087
THR 740.0128
VAL 750.0126
LEU 760.0181
VAL 770.0184
GLY 780.0218
PRO 790.0168
THR 800.0159
PRO 810.0275
VAL 820.0253
VAL 820.0253
ASN 830.0178
ILE 840.0097
ILE 850.0066
GLY 860.0038
ARG 870.0097
ASN 880.0083
LEU 890.0073
LEU 900.0072
THR 910.0091
GLN 920.0079
ILE 930.0120
GLY 940.0068
CYS 950.0054
THR 960.0178
LEU 970.0159
ASN 980.0272
PHE 990.0343

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.