CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025651

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1011
PRO 10.0422
GLN 20.0223
ILE 30.0298
THR 40.0461
LEU 50.0215
TRP 60.0591
LYS 70.0162
ARG 80.0147
PRO 90.0254
LEU 100.0151
VAL 110.0108
THR 120.0158
ILE 130.0137
ARG 140.0118
ILE 150.0120
GLY 160.0186
GLY 170.0138
GLN 180.0152
LEU 190.0123
LEU 190.0123
LYS 200.0150
GLU 210.0183
GLU 210.0184
ALA 220.0175
LEU 230.0153
LEU 240.0197
ASP 250.0243
THR 260.0203
GLY 270.0215
ALA 280.0238
ASP 290.0227
ASP 300.0152
THR 310.0111
VAL 320.0132
LEU 330.0087
GLU 340.0072
GLU 350.0149
MET 360.0117
ASN 370.0146
LEU 380.0157
PRO 390.0257
GLY 400.1011
LYS 410.0488
TRP 420.0176
LYS 430.0135
PRO 440.0400
LYS 450.0127
MET 460.0111
ILE 470.0192
ILE 470.0192
GLY 480.0291
GLY 490.0272
ILE 500.0178
GLY 510.0134
GLY 520.0241
PHE 530.0226
ILE 540.0145
LYS 550.0124
VAL 560.0161
ARG 570.0189
GLN 580.0128
TYR 590.0161
ASP 600.0193
GLN 610.0265
ILE 620.0210
PRO 630.0272
VAL 640.0139
GLU 650.0164
ILE 660.0099
CYS 670.0177
GLY 680.0235
HIS 690.0273
LYS 700.0181
ALA 710.0163
ILE 720.0294
GLY 730.0225
THR 740.0140
VAL 750.0109
LEU 760.0136
VAL 770.0148
GLY 780.0116
PRO 790.0133
THR 800.0106
PRO 810.0275
VAL 820.0187
VAL 820.0187
ASN 830.0170
ILE 840.0166
ILE 850.0130
GLY 860.0170
ARG 870.0082
ASN 880.0056
LEU 890.0092
LEU 900.0111
THR 910.0221
GLN 920.0301
ILE 930.0278
GLY 940.0327
CYS 950.0217
CYS 950.0222
THR 960.0151
LEU 970.0138
ASN 980.0113
PHE 990.0103
PRO 10.0232
GLN 20.0141
ILE 30.0096
THR 40.0039
LEU 50.0054
TRP 60.0056
LYS 70.0102
ARG 80.0075
PRO 90.0050
LEU 100.0022
VAL 110.0051
THR 120.0048
ILE 130.0026
ARG 140.0060
ILE 150.0108
GLY 160.0230
GLY 170.0184
GLN 180.0126
LEU 190.0223
LYS 200.0152
GLU 210.0121
ALA 220.0104
LEU 230.0025
LEU 240.0038
ASP 250.0120
THR 260.0201
GLY 270.0215
ALA 280.0087
ASP 290.0126
ASP 300.0136
THR 310.0150
VAL 320.0115
VAL 320.0116
LEU 330.0120
GLU 340.0112
GLU 350.0166
MET 360.0179
ASN 370.0222
LEU 380.0090
PRO 390.0669
GLY 400.0496
LYS 410.0404
TRP 420.0166
LYS 430.0192
PRO 440.0270
LYS 450.0105
MET 460.0082
MET 460.0090
ILE 470.0244
GLY 480.0333
GLY 490.0397
ILE 500.0260
GLY 510.0294
GLY 520.0272
PHE 530.0158
ILE 540.0358
LYS 550.0267
VAL 560.0123
ARG 570.0103
GLN 580.0126
TYR 590.0154
ASP 600.0193
GLN 610.0253
ILE 620.0148
PRO 630.0074
VAL 640.0079
GLU 650.0126
GLU 650.0122
ILE 660.0093
CYS 670.0114
GLY 680.0165
HIS 690.0189
LYS 700.0158
ALA 710.0096
ILE 720.0071
GLY 730.0094
THR 740.0133
VAL 750.0135
LEU 760.0099
VAL 770.0058
GLY 780.0033
PRO 790.0124
THR 800.0083
PRO 810.0140
VAL 820.0058
VAL 820.0057
ASN 830.0111
ILE 840.0084
ILE 850.0088
GLY 860.0100
ARG 870.0107
ASN 880.0209
LEU 890.0146
LEU 900.0052
THR 910.0215
GLN 920.0175
ILE 930.0117
GLY 940.0154
CYS 950.0084
THR 960.0139
LEU 970.0191
ASN 980.0228
PHE 990.0312

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.