CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025651

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1518
PRO 10.0255
GLN 20.0504
ILE 30.0326
THR 40.0377
LEU 50.0259
TRP 60.0238
LYS 70.0213
ARG 80.0212
PRO 90.0133
LEU 100.0118
VAL 110.0055
THR 120.0082
ILE 130.0063
ARG 140.0075
ILE 150.0084
GLY 160.0047
GLY 170.0157
GLN 180.0143
LEU 190.0124
LEU 190.0124
LYS 200.0101
GLU 210.0142
GLU 210.0147
ALA 220.0143
LEU 230.0156
LEU 240.0084
ASP 250.0094
THR 260.0143
GLY 270.0189
ALA 280.0079
ASP 290.0095
ASP 300.0071
THR 310.0088
VAL 320.0081
LEU 330.0091
GLU 340.0245
GLU 350.0230
MET 360.0080
ASN 370.0109
LEU 380.0093
PRO 390.0679
GLY 400.0231
LYS 410.0198
TRP 420.0151
LYS 430.0165
PRO 440.0168
LYS 450.0115
MET 460.0215
ILE 470.0160
ILE 470.0160
GLY 480.0035
GLY 490.0207
ILE 500.0252
GLY 510.0201
GLY 520.0222
PHE 530.0163
ILE 540.0182
LYS 550.0185
VAL 560.0163
ARG 570.0059
GLN 580.0067
TYR 590.0081
ASP 600.0135
GLN 610.0167
ILE 620.0148
PRO 630.0229
VAL 640.0151
GLU 650.0150
ILE 660.0113
CYS 670.0115
GLY 680.0295
HIS 690.0117
LYS 700.0133
ALA 710.0200
ILE 720.0192
GLY 730.0135
THR 740.0114
VAL 750.0096
LEU 760.0069
VAL 770.0026
GLY 780.0132
PRO 790.0307
THR 800.0293
PRO 810.0599
VAL 820.0398
VAL 820.0398
ASN 830.0217
ILE 840.0181
ILE 850.0036
GLY 860.0046
ARG 870.0176
ASN 880.0107
LEU 890.0153
LEU 900.0149
THR 910.0304
GLN 920.0287
ILE 930.0205
GLY 940.0174
CYS 950.0056
CYS 950.0055
THR 960.0166
LEU 970.0200
ASN 980.0187
PHE 990.0107
PRO 10.1118
GLN 20.0472
ILE 30.0341
THR 40.0176
LEU 50.0222
TRP 60.0341
LYS 70.0383
ARG 80.0313
PRO 90.0254
LEU 100.0294
VAL 110.0185
THR 120.0146
ILE 130.0097
ARG 140.0099
ILE 150.0121
GLY 160.0231
GLY 170.0160
GLN 180.0186
LEU 190.0263
LYS 200.0098
GLU 210.0146
ALA 220.0178
LEU 230.0223
LEU 240.0161
ASP 250.0237
THR 260.0194
GLY 270.0223
ALA 280.0280
ASP 290.0286
ASP 300.0202
THR 310.0151
VAL 320.0122
VAL 320.0123
LEU 330.0106
GLU 340.0124
GLU 350.0197
MET 360.0209
ASN 370.0144
LEU 380.0081
PRO 390.0357
GLY 400.1518
LYS 410.0453
TRP 420.0248
LYS 430.0300
PRO 440.0329
LYS 450.0225
MET 460.0209
MET 460.0211
ILE 470.0273
GLY 480.0406
GLY 490.0125
ILE 500.0246
GLY 510.0178
GLY 520.0113
PHE 530.0149
ILE 540.0170
LYS 550.0233
VAL 560.0263
ARG 570.0257
GLN 580.0193
TYR 590.0158
ASP 600.0286
GLN 610.0378
ILE 620.0244
PRO 630.0084
VAL 640.0075
GLU 650.0148
GLU 650.0143
ILE 660.0115
CYS 670.0102
GLY 680.0138
HIS 690.0134
LYS 700.0196
ALA 710.0152
ILE 720.0159
GLY 730.0143
THR 740.0209
VAL 750.0180
LEU 760.0090
VAL 770.0132
GLY 780.0052
PRO 790.0085
THR 800.0111
PRO 810.0159
VAL 820.0190
VAL 820.0191
ASN 830.0134
ILE 840.0162
ILE 850.0189
GLY 860.0236
ARG 870.0230
ASN 880.0155
LEU 890.0123
LEU 900.0170
THR 910.0213
GLN 920.0171
ILE 930.0201
GLY 940.0250
CYS 950.0272
THR 960.0297
LEU 970.0215
ASN 980.0183
PHE 990.0037

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.