CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025651

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0913
PRO 10.0913
GLN 20.0648
ILE 30.0288
THR 40.0169
LEU 50.0089
TRP 60.0162
LYS 70.0170
ARG 80.0134
PRO 90.0053
LEU 100.0175
VAL 110.0185
THR 120.0235
ILE 130.0175
ARG 140.0118
ILE 150.0057
GLY 160.0075
GLY 170.0137
GLN 180.0048
LEU 190.0077
LEU 190.0075
LYS 200.0070
GLU 210.0282
GLU 210.0303
ALA 220.0158
LEU 230.0105
LEU 240.0093
ASP 250.0079
THR 260.0122
GLY 270.0114
ALA 280.0115
ASP 290.0131
ASP 300.0140
THR 310.0111
VAL 320.0097
LEU 330.0120
GLU 340.0154
GLU 350.0353
MET 360.0200
ASN 370.0086
LEU 380.0070
PRO 390.0625
GLY 400.0288
LYS 410.0408
TRP 420.0217
LYS 430.0148
PRO 440.0085
LYS 450.0064
MET 460.0124
ILE 470.0120
ILE 470.0120
GLY 480.0284
GLY 490.0283
ILE 500.0074
GLY 510.0133
GLY 520.0211
PHE 530.0169
ILE 540.0140
LYS 550.0118
VAL 560.0080
ARG 570.0165
GLN 580.0162
TYR 590.0163
ASP 600.0256
GLN 610.0163
ILE 620.0141
PRO 630.0174
VAL 640.0131
GLU 650.0084
ILE 660.0264
CYS 670.0352
GLY 680.0354
HIS 690.0180
LYS 700.0123
ALA 710.0177
ILE 720.0140
GLY 730.0124
THR 740.0173
VAL 750.0132
LEU 760.0095
VAL 770.0130
GLY 780.0133
PRO 790.0204
THR 800.0159
PRO 810.0151
VAL 820.0182
VAL 820.0179
ASN 830.0209
ILE 840.0148
ILE 850.0059
GLY 860.0082
ARG 870.0066
ASN 880.0086
LEU 890.0067
LEU 900.0096
THR 910.0065
GLN 920.0041
ILE 930.0121
GLY 940.0160
CYS 950.0173
CYS 950.0165
THR 960.0276
LEU 970.0211
ASN 980.0279
PHE 990.0251
PRO 10.0817
GLN 20.0341
ILE 30.0113
THR 40.0140
LEU 50.0111
TRP 60.0061
LYS 70.0062
ARG 80.0026
PRO 90.0112
LEU 100.0168
VAL 110.0195
THR 120.0143
ILE 130.0088
ARG 140.0035
ILE 150.0140
GLY 160.0269
GLY 170.0597
GLN 180.0432
LEU 190.0178
LYS 200.0105
GLU 210.0163
ALA 220.0106
LEU 230.0097
LEU 240.0123
ASP 250.0148
THR 260.0125
GLY 270.0111
ALA 280.0145
ASP 290.0135
ASP 300.0130
THR 310.0115
VAL 320.0061
VAL 320.0062
LEU 330.0034
GLU 340.0125
GLU 350.0184
MET 360.0127
ASN 370.0133
LEU 380.0168
PRO 390.0267
GLY 400.0401
LYS 410.0171
TRP 420.0089
LYS 430.0154
PRO 440.0216
LYS 450.0094
MET 460.0132
MET 460.0132
ILE 470.0190
GLY 480.0317
GLY 490.0145
ILE 500.0145
GLY 510.0187
GLY 520.0187
PHE 530.0095
ILE 540.0165
LYS 550.0127
VAL 560.0140
ARG 570.0086
GLN 580.0087
TYR 590.0096
ASP 600.0141
GLN 610.0093
ILE 620.0095
PRO 630.0054
VAL 640.0043
GLU 650.0132
GLU 650.0149
ILE 660.0079
CYS 670.0177
GLY 680.0277
HIS 690.0278
LYS 700.0622
ALA 710.0261
ILE 720.0142
GLY 730.0087
THR 740.0119
VAL 750.0112
LEU 760.0065
VAL 770.0043
GLY 780.0100
PRO 790.0153
THR 800.0104
PRO 810.0208
VAL 820.0105
VAL 820.0105
ASN 830.0070
ILE 840.0083
ILE 850.0101
GLY 860.0141
ARG 870.0131
ASN 880.0087
LEU 890.0120
LEU 900.0150
THR 910.0220
GLN 920.0302
ILE 930.0182
GLY 940.0249
CYS 950.0225
THR 960.0223
LEU 970.0154
ASN 980.0143
PHE 990.0237

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.