CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025651

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0897
PRO 10.0407
GLN 20.0132
ILE 30.0051
THR 40.0213
LEU 50.0271
TRP 60.0809
LYS 70.0897
ARG 80.0442
PRO 90.0222
LEU 100.0281
VAL 110.0169
THR 120.0145
ILE 130.0186
ARG 140.0228
ILE 150.0181
GLY 160.0208
GLY 170.0311
GLN 180.0205
LEU 190.0303
LEU 190.0302
LYS 200.0267
GLU 210.0135
GLU 210.0136
ALA 220.0147
LEU 230.0157
LEU 240.0182
ASP 250.0139
THR 260.0090
GLY 270.0040
ALA 280.0062
ASP 290.0111
ASP 300.0058
THR 310.0048
VAL 320.0112
LEU 330.0178
GLU 340.0292
GLU 350.0337
MET 360.0104
ASN 370.0227
LEU 380.0247
PRO 390.0554
GLY 400.0404
LYS 410.0491
TRP 420.0124
LYS 430.0119
PRO 440.0040
LYS 450.0215
MET 460.0408
ILE 470.0226
ILE 470.0227
GLY 480.0211
GLY 490.0164
ILE 500.0204
GLY 510.0061
GLY 520.0158
PHE 530.0296
ILE 540.0189
LYS 550.0206
VAL 560.0118
ARG 570.0143
GLN 580.0134
TYR 590.0143
ASP 600.0148
GLN 610.0237
ILE 620.0123
PRO 630.0120
VAL 640.0059
GLU 650.0101
ILE 660.0088
CYS 670.0135
GLY 680.0118
HIS 690.0058
LYS 700.0122
ALA 710.0145
ILE 720.0125
GLY 730.0101
THR 740.0091
VAL 750.0072
LEU 760.0100
VAL 770.0053
GLY 780.0086
PRO 790.0164
THR 800.0139
PRO 810.0182
VAL 820.0125
VAL 820.0128
ASN 830.0160
ILE 840.0115
ILE 850.0142
GLY 860.0128
ARG 870.0116
ASN 880.0106
LEU 890.0054
LEU 900.0089
THR 910.0104
GLN 920.0058
ILE 930.0068
GLY 940.0154
CYS 950.0142
CYS 950.0143
THR 960.0114
LEU 970.0146
ASN 980.0179
PHE 990.0219
PRO 10.0348
GLN 20.0291
ILE 30.0153
THR 40.0074
LEU 50.0092
TRP 60.0229
LYS 70.0139
ARG 80.0142
PRO 90.0125
LEU 100.0252
VAL 110.0094
THR 120.0114
ILE 130.0137
ARG 140.0242
ILE 150.0242
GLY 160.0390
GLY 170.0403
GLN 180.0139
LEU 190.0371
LYS 200.0179
GLU 210.0066
ALA 220.0217
LEU 230.0250
LEU 240.0109
ASP 250.0045
THR 260.0113
GLY 270.0166
ALA 280.0172
ASP 290.0363
ASP 300.0104
THR 310.0156
VAL 320.0270
VAL 320.0270
LEU 330.0275
GLU 340.0208
GLU 350.0327
MET 360.0499
ASN 370.0436
LEU 380.0177
PRO 390.0223
GLY 400.0372
LYS 410.0491
TRP 420.0416
LYS 430.0367
PRO 440.0189
LYS 450.0092
MET 460.0174
MET 460.0169
ILE 470.0160
GLY 480.0208
GLY 490.0122
ILE 500.0050
GLY 510.0052
GLY 520.0114
PHE 530.0250
ILE 540.0081
LYS 550.0095
VAL 560.0102
ARG 570.0282
GLN 580.0282
TYR 590.0193
ASP 600.0325
GLN 610.0219
ILE 620.0146
PRO 630.0231
VAL 640.0164
GLU 650.0159
GLU 650.0152
ILE 660.0118
CYS 670.0162
GLY 680.0352
HIS 690.0184
LYS 700.0222
ALA 710.0111
ILE 720.0086
GLY 730.0255
THR 740.0248
VAL 750.0111
LEU 760.0055
VAL 770.0220
GLY 780.0158
PRO 790.0033
THR 800.0251
PRO 810.0414
VAL 820.0389
VAL 820.0392
ASN 830.0356
ILE 840.0334
ILE 850.0164
GLY 860.0071
ARG 870.0171
ASN 880.0096
LEU 890.0114
LEU 900.0112
THR 910.0245
GLN 920.0084
ILE 930.0073
GLY 940.0090
CYS 950.0119
THR 960.0181
LEU 970.0086
ASN 980.0080
PHE 990.0191

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.