CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609373025651

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0932
PRO 10.0679
GLN 20.0283
ILE 30.0119
THR 40.0203
LEU 50.0126
TRP 60.0347
LYS 70.0449
ARG 80.0066
PRO 90.0098
LEU 100.0210
VAL 110.0133
THR 120.0159
ILE 130.0105
ARG 140.0106
ILE 150.0137
GLY 160.0469
GLY 170.0514
GLN 180.0120
LEU 190.0210
LEU 190.0206
LYS 200.0079
GLU 210.0156
GLU 210.0160
ALA 220.0085
LEU 230.0075
LEU 240.0072
ASP 250.0056
THR 260.0068
GLY 270.0122
ALA 280.0074
ASP 290.0111
ASP 300.0068
THR 310.0068
VAL 320.0105
LEU 330.0139
GLU 340.0157
GLU 350.0441
MET 360.0223
ASN 370.0287
LEU 380.0253
PRO 390.0188
GLY 400.0596
LYS 410.0469
TRP 420.0163
LYS 430.0131
PRO 440.0110
LYS 450.0185
MET 460.0123
ILE 470.0051
ILE 470.0050
GLY 480.0130
GLY 490.0117
ILE 500.0152
GLY 510.0153
GLY 520.0284
PHE 530.0147
ILE 540.0069
LYS 550.0030
VAL 560.0018
ARG 570.0037
GLN 580.0093
TYR 590.0067
ASP 600.0254
GLN 610.0272
ILE 620.0104
PRO 630.0154
VAL 640.0112
GLU 650.0168
ILE 660.0219
CYS 670.0306
GLY 680.0932
HIS 690.0540
LYS 700.0231
ALA 710.0141
ILE 720.0152
GLY 730.0133
THR 740.0153
VAL 750.0150
LEU 760.0077
VAL 770.0103
GLY 780.0068
PRO 790.0104
THR 800.0155
PRO 810.0278
VAL 820.0111
VAL 820.0108
ASN 830.0048
ILE 840.0062
ILE 850.0023
GLY 860.0045
ARG 870.0039
ASN 880.0082
LEU 890.0075
LEU 900.0048
THR 910.0182
GLN 920.0142
ILE 930.0269
GLY 940.0252
CYS 950.0099
CYS 950.0096
THR 960.0162
LEU 970.0128
ASN 980.0279
PHE 990.0257
PRO 10.0328
GLN 20.0245
ILE 30.0067
THR 40.0103
LEU 50.0114
TRP 60.0437
LYS 70.0311
ARG 80.0203
PRO 90.0118
LEU 100.0255
VAL 110.0152
THR 120.0257
ILE 130.0227
ARG 140.0145
ILE 150.0103
GLY 160.0183
GLY 170.0496
GLN 180.0255
LEU 190.0216
LYS 200.0157
GLU 210.0173
ALA 220.0111
LEU 230.0046
LEU 240.0085
ASP 250.0052
THR 260.0055
GLY 270.0016
ALA 280.0070
ASP 290.0150
ASP 300.0099
THR 310.0131
VAL 320.0115
VAL 320.0116
LEU 330.0123
GLU 340.0130
GLU 350.0227
MET 360.0177
ASN 370.0081
LEU 380.0094
PRO 390.0122
GLY 400.0128
LYS 410.0193
TRP 420.0138
LYS 430.0104
PRO 440.0121
LYS 450.0178
MET 460.0257
MET 460.0257
ILE 470.0112
GLY 480.0178
GLY 490.0091
ILE 500.0151
GLY 510.0161
GLY 520.0129
PHE 530.0142
ILE 540.0044
LYS 550.0115
VAL 560.0074
ARG 570.0075
GLN 580.0133
TYR 590.0076
ASP 600.0158
GLN 610.0247
ILE 620.0290
PRO 630.0279
VAL 640.0180
GLU 650.0177
GLU 650.0196
ILE 660.0123
CYS 670.0409
GLY 680.0894
HIS 690.0426
LYS 700.0113
ALA 710.0135
ILE 720.0279
GLY 730.0203
THR 740.0145
VAL 750.0142
LEU 760.0023
VAL 770.0038
GLY 780.0076
PRO 790.0158
THR 800.0162
PRO 810.0188
VAL 820.0125
VAL 820.0130
ASN 830.0084
ILE 840.0083
ILE 850.0094
GLY 860.0081
ARG 870.0060
ASN 880.0124
LEU 890.0157
LEU 900.0141
THR 910.0183
GLN 920.0248
ILE 930.0321
GLY 940.0343
CYS 950.0169
THR 960.0166
LEU 970.0089
ASN 980.0219
PHE 990.0299

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.