CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609383025684

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0783
PRO 10.0307
GLN 20.0413
ILE 30.0228
THR 40.0261
LEU 50.0130
TRP 60.0295
LYS 70.0556
ARG 80.0226
PRO 90.0207
LEU 100.0350
VAL 110.0388
THR 120.0411
ILE 130.0319
ARG 140.0206
ILE 150.0339
GLY 160.0559
GLY 170.0783
GLN 180.0437
LEU 190.0154
LEU 190.0147
LYS 200.0235
GLU 210.0451
GLU 210.0460
ALA 220.0391
LEU 230.0269
LEU 240.0126
ASP 250.0062
THR 260.0078
GLY 270.0061
ALA 280.0076
ASP 290.0064
ASP 300.0071
THR 310.0061
VAL 320.0128
LEU 330.0147
GLU 340.0206
GLU 350.0255
MET 360.0278
ASN 370.0336
LEU 380.0289
PRO 390.0473
GLY 400.0524
LYS 410.0303
TRP 420.0260
LYS 430.0306
PRO 440.0374
LYS 450.0353
MET 460.0239
ILE 470.0251
ILE 470.0251
GLY 480.0261
GLY 490.0265
ILE 500.0165
GLY 510.0204
GLY 520.0271
PHE 530.0223
ILE 540.0197
LYS 550.0212
VAL 560.0237
ARG 570.0251
GLN 580.0254
TYR 590.0208
ASP 600.0086
GLN 610.0114
ILE 620.0158
PRO 630.0204
VAL 640.0218
GLU 650.0281
ILE 660.0203
CYS 670.0240
GLY 680.0340
HIS 690.0049
LYS 700.0180
ALA 710.0144
ILE 720.0222
GLY 730.0102
THR 740.0124
VAL 750.0153
LEU 760.0095
VAL 770.0147
GLY 780.0139
PRO 790.0180
THR 800.0250
PRO 810.0297
VAL 820.0295
VAL 820.0293
ASN 830.0320
ILE 840.0244
ILE 850.0152
GLY 860.0061
ARG 870.0105
ASN 880.0099
LEU 890.0073
LEU 900.0146
THR 910.0235
GLN 920.0193
ILE 930.0203
GLY 940.0299
CYS 950.0226
CYS 950.0228
THR 960.0193
LEU 970.0146
ASN 980.0243
PHE 990.0225
PRO 10.0567
GLN 20.0345
ILE 30.0076
THR 40.0087
LEU 50.0122
TRP 60.0153
LYS 70.0216
ARG 80.0068
PRO 90.0031
LEU 100.0029
VAL 110.0090
THR 120.0128
ILE 130.0093
ARG 140.0165
ILE 150.0196
GLY 160.0315
GLY 170.0595
GLN 180.0319
LEU 190.0173
LYS 200.0111
GLU 210.0042
ALA 220.0056
LEU 230.0078
LEU 240.0055
ASP 250.0078
THR 260.0071
GLY 270.0026
ALA 280.0105
ASP 290.0209
ASP 300.0171
THR 310.0127
VAL 320.0069
VAL 320.0071
LEU 330.0118
GLU 340.0182
GLU 350.0096
MET 360.0112
ASN 370.0584
LEU 380.0146
PRO 390.0211
GLY 400.0486
LYS 410.0242
TRP 420.0089
LYS 430.0104
PRO 440.0185
LYS 450.0112
MET 460.0071
MET 460.0072
ILE 470.0056
GLY 480.0134
GLY 490.0110
ILE 500.0182
GLY 510.0225
GLY 520.0142
PHE 530.0105
ILE 540.0057
LYS 550.0096
VAL 560.0063
ARG 570.0084
GLN 580.0113
TYR 590.0127
ASP 600.0181
GLN 610.0161
ILE 620.0164
PRO 630.0119
VAL 640.0093
GLU 650.0097
GLU 650.0097
ILE 660.0108
CYS 670.0126
GLY 680.0160
HIS 690.0110
LYS 700.0113
ALA 710.0118
ILE 720.0134
GLY 730.0116
THR 740.0151
VAL 750.0080
LEU 760.0083
VAL 770.0022
GLY 780.0051
PRO 790.0092
THR 800.0140
PRO 810.0236
VAL 820.0168
VAL 820.0167
ASN 830.0151
ILE 840.0089
ILE 850.0094
GLY 860.0140
ARG 870.0178
ASN 880.0197
LEU 890.0134
LEU 900.0132
THR 910.0154
GLN 920.0127
ILE 930.0089
GLY 940.0159
CYS 950.0148
THR 960.0246
LEU 970.0221
ASN 980.0272
PHE 990.0279

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.