CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609383025684

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0715
PRO 10.0352
GLN 20.0233
ILE 30.0247
THR 40.0210
LEU 50.0045
TRP 60.0612
LYS 70.0491
ARG 80.0373
PRO 90.0103
LEU 100.0118
VAL 110.0155
THR 120.0113
ILE 130.0040
ARG 140.0074
ILE 150.0094
GLY 160.0146
GLY 170.0105
GLN 180.0164
LEU 190.0066
LEU 190.0068
LYS 200.0096
GLU 210.0208
GLU 210.0214
ALA 220.0100
LEU 230.0023
LEU 240.0047
ASP 250.0058
THR 260.0099
GLY 270.0150
ALA 280.0240
ASP 290.0377
ASP 300.0197
THR 310.0101
VAL 320.0012
LEU 330.0081
GLU 340.0147
GLU 350.0099
MET 360.0074
ASN 370.0049
LEU 380.0101
PRO 390.0318
GLY 400.0630
LYS 410.0397
TRP 420.0123
LYS 430.0048
PRO 440.0168
LYS 450.0168
MET 460.0204
ILE 470.0229
ILE 470.0231
GLY 480.0218
GLY 490.0158
ILE 500.0122
GLY 510.0135
GLY 520.0141
PHE 530.0195
ILE 540.0135
LYS 550.0183
VAL 560.0159
ARG 570.0117
GLN 580.0115
TYR 590.0122
ASP 600.0223
GLN 610.0209
ILE 620.0161
PRO 630.0116
VAL 640.0080
GLU 650.0099
ILE 660.0135
CYS 670.0209
GLY 680.0359
HIS 690.0178
LYS 700.0219
ALA 710.0120
ILE 720.0106
GLY 730.0166
THR 740.0169
VAL 750.0141
LEU 760.0112
VAL 770.0110
GLY 780.0100
PRO 790.0092
THR 800.0126
PRO 810.0241
VAL 820.0240
VAL 820.0241
ASN 830.0127
ILE 840.0075
ILE 850.0086
GLY 860.0162
ARG 870.0198
ASN 880.0252
LEU 890.0230
LEU 900.0196
THR 910.0276
GLN 920.0296
ILE 930.0268
GLY 940.0340
CYS 950.0173
CYS 950.0175
THR 960.0150
LEU 970.0231
ASN 980.0409
PHE 990.0406
PRO 10.0516
GLN 20.0607
ILE 30.0230
THR 40.0125
LEU 50.0149
TRP 60.0154
LYS 70.0154
ARG 80.0157
PRO 90.0135
LEU 100.0142
VAL 110.0065
THR 120.0239
ILE 130.0194
ARG 140.0257
ILE 150.0139
GLY 160.0322
GLY 170.0354
GLN 180.0097
LEU 190.0356
LYS 200.0229
GLU 210.0163
ALA 220.0127
LEU 230.0158
LEU 240.0193
ASP 250.0173
THR 260.0163
GLY 270.0139
ALA 280.0204
ASP 290.0303
ASP 300.0069
THR 310.0108
VAL 320.0088
VAL 320.0088
LEU 330.0134
GLU 340.0136
GLU 350.0073
MET 360.0103
ASN 370.0335
LEU 380.0150
PRO 390.0439
GLY 400.0715
LYS 410.0460
TRP 420.0191
LYS 430.0157
PRO 440.0214
LYS 450.0205
MET 460.0248
MET 460.0243
ILE 470.0241
GLY 480.0200
GLY 490.0085
ILE 500.0078
GLY 510.0044
GLY 520.0165
PHE 530.0244
ILE 540.0121
LYS 550.0053
VAL 560.0090
ARG 570.0077
GLN 580.0152
TYR 590.0122
ASP 600.0367
GLN 610.0402
ILE 620.0199
PRO 630.0221
VAL 640.0200
GLU 650.0255
GLU 650.0257
ILE 660.0178
CYS 670.0248
GLY 680.0299
HIS 690.0186
LYS 700.0179
ALA 710.0170
ILE 720.0301
GLY 730.0316
THR 740.0196
VAL 750.0110
LEU 760.0068
VAL 770.0033
GLY 780.0059
PRO 790.0130
THR 800.0126
PRO 810.0221
VAL 820.0174
VAL 820.0173
ASN 830.0155
ILE 840.0135
ILE 850.0118
GLY 860.0139
ARG 870.0103
ASN 880.0059
LEU 890.0149
LEU 900.0174
THR 910.0043
GLN 920.0068
ILE 930.0174
GLY 940.0194
CYS 950.0305
THR 960.0284
LEU 970.0187
ASN 980.0177
PHE 990.0196

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.