CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609383025684

---  normal mode 61  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1408
PRO 10.0164
GLN 20.0256
ILE 30.0090
THR 40.0140
LEU 50.0092
TRP 60.0209
LYS 70.0165
ARG 80.0162
PRO 90.0072
LEU 100.0137
VAL 110.0170
THR 120.0147
ILE 130.0131
ARG 140.0188
ILE 150.0116
GLY 160.0084
GLY 170.0123
GLN 180.0080
LEU 190.0232
LEU 190.0231
LYS 200.0135
GLU 210.0082
GLU 210.0083
ALA 220.0086
LEU 230.0110
LEU 240.0077
ASP 250.0076
THR 260.0033
GLY 270.0064
ALA 280.0081
ASP 290.0126
ASP 300.0116
THR 310.0128
VAL 320.0057
LEU 330.0082
GLU 340.0251
GLU 350.0281
MET 360.0277
ASN 370.0326
LEU 380.0152
PRO 390.0229
GLY 400.0099
LYS 410.0210
TRP 420.0225
LYS 430.0197
PRO 440.0125
LYS 450.0128
MET 460.0281
ILE 470.0390
ILE 470.0388
GLY 480.0467
GLY 490.0563
ILE 500.0516
GLY 510.0682
GLY 520.0432
PHE 530.0494
ILE 540.0267
LYS 550.0207
VAL 560.0186
ARG 570.0161
GLN 580.0172
TYR 590.0216
ASP 600.0252
GLN 610.0246
ILE 620.0171
PRO 630.0127
VAL 640.0099
GLU 650.0111
ILE 660.0102
CYS 670.0147
GLY 680.0115
HIS 690.0101
LYS 700.0066
ALA 710.0040
ILE 720.0111
GLY 730.0172
THR 740.0189
VAL 750.0161
LEU 760.0125
VAL 770.0090
GLY 780.0150
PRO 790.0246
THR 800.0215
PRO 810.0540
VAL 820.0257
VAL 820.0256
ASN 830.0074
ILE 840.0063
ILE 850.0093
GLY 860.0089
ARG 870.0091
ASN 880.0097
LEU 890.0102
LEU 900.0113
THR 910.0155
GLN 920.0137
ILE 930.0195
GLY 940.0226
CYS 950.0192
CYS 950.0191
THR 960.0114
LEU 970.0104
ASN 980.0064
PHE 990.0059
PRO 10.0608
GLN 20.0368
ILE 30.0191
THR 40.0084
LEU 50.0106
TRP 60.0148
LYS 70.0137
ARG 80.0068
PRO 90.0069
LEU 100.0055
VAL 110.0080
THR 120.0084
ILE 130.0101
ARG 140.0107
ILE 150.0156
GLY 160.0233
GLY 170.0327
GLN 180.0257
LEU 190.0168
LYS 200.0121
GLU 210.0051
ALA 220.0042
LEU 230.0088
LEU 240.0107
ASP 250.0126
THR 260.0086
GLY 270.0149
ALA 280.0170
ASP 290.0253
ASP 300.0081
THR 310.0072
VAL 320.0067
VAL 320.0067
LEU 330.0113
GLU 340.0156
GLU 350.0207
MET 360.0082
ASN 370.0124
LEU 380.0142
PRO 390.0341
GLY 400.1408
LYS 410.0213
TRP 420.0170
LYS 430.0207
PRO 440.0112
LYS 450.0103
MET 460.0169
MET 460.0166
ILE 470.0201
GLY 480.0307
GLY 490.0452
ILE 500.0551
GLY 510.0665
GLY 520.0476
PHE 530.0353
ILE 540.0043
LYS 550.0186
VAL 560.0120
ARG 570.0098
GLN 580.0113
TYR 590.0114
ASP 600.0251
GLN 610.0230
ILE 620.0164
PRO 630.0192
VAL 640.0169
GLU 650.0162
GLU 650.0161
ILE 660.0171
CYS 670.0155
GLY 680.0293
HIS 690.0252
LYS 700.0126
ALA 710.0144
ILE 720.0204
GLY 730.0207
THR 740.0172
VAL 750.0114
LEU 760.0080
VAL 770.0104
GLY 780.0122
PRO 790.0158
THR 800.0057
PRO 810.0146
VAL 820.0182
VAL 820.0183
ASN 830.0100
ILE 840.0074
ILE 850.0066
GLY 860.0080
ARG 870.0050
ASN 880.0121
LEU 890.0114
LEU 900.0033
THR 910.0049
GLN 920.0089
ILE 930.0088
GLY 940.0114
CYS 950.0091
THR 960.0120
LEU 970.0095
ASN 980.0130
PHE 990.0194

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.