CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609383025684

---  normal mode 65  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0757
PRO 10.0188
GLN 20.0072
ILE 30.0098
THR 40.0226
LEU 50.0141
TRP 60.0472
LYS 70.0757
ARG 80.0207
PRO 90.0169
LEU 100.0358
VAL 110.0289
THR 120.0169
ILE 130.0053
ARG 140.0151
ILE 150.0142
GLY 160.0117
GLY 170.0296
GLN 180.0197
LEU 190.0177
LEU 190.0178
LYS 200.0183
GLU 210.0348
GLU 210.0364
ALA 220.0202
LEU 230.0142
LEU 240.0063
ASP 250.0039
THR 260.0092
GLY 270.0062
ALA 280.0064
ASP 290.0113
ASP 300.0149
THR 310.0135
VAL 320.0113
LEU 330.0083
GLU 340.0193
GLU 350.0306
MET 360.0221
ASN 370.0266
LEU 380.0257
PRO 390.0362
GLY 400.0354
LYS 410.0329
TRP 420.0219
LYS 430.0102
PRO 440.0175
LYS 450.0162
MET 460.0232
ILE 470.0264
ILE 470.0264
GLY 480.0271
GLY 490.0179
ILE 500.0124
GLY 510.0271
GLY 520.0501
PHE 530.0433
ILE 540.0311
LYS 550.0129
VAL 560.0083
ARG 570.0070
GLN 580.0108
TYR 590.0133
ASP 600.0138
GLN 610.0176
ILE 620.0156
PRO 630.0202
VAL 640.0166
GLU 650.0156
ILE 660.0093
CYS 670.0127
GLY 680.0328
HIS 690.0212
LYS 700.0164
ALA 710.0172
ILE 720.0210
GLY 730.0129
THR 740.0085
VAL 750.0073
LEU 760.0073
VAL 770.0068
GLY 780.0042
PRO 790.0083
THR 800.0111
PRO 810.0181
VAL 820.0178
VAL 820.0177
ASN 830.0173
ILE 840.0110
ILE 850.0057
GLY 860.0070
ARG 870.0033
ASN 880.0068
LEU 890.0056
LEU 900.0045
THR 910.0053
GLN 920.0095
ILE 930.0129
GLY 940.0213
CYS 950.0164
CYS 950.0161
THR 960.0162
LEU 970.0110
ASN 980.0101
PHE 990.0123
PRO 10.0735
GLN 20.0380
ILE 30.0206
THR 40.0149
LEU 50.0185
TRP 60.0341
LYS 70.0297
ARG 80.0288
PRO 90.0294
LEU 100.0386
VAL 110.0269
THR 120.0147
ILE 130.0092
ARG 140.0218
ILE 150.0248
GLY 160.0422
GLY 170.0510
GLN 180.0387
LEU 190.0366
LYS 200.0080
GLU 210.0294
ALA 220.0186
LEU 230.0160
LEU 240.0198
ASP 250.0165
THR 260.0146
GLY 270.0165
ALA 280.0282
ASP 290.0453
ASP 300.0259
THR 310.0161
VAL 320.0123
VAL 320.0123
LEU 330.0115
GLU 340.0208
GLU 350.0152
MET 360.0090
ASN 370.0127
LEU 380.0102
PRO 390.0084
GLY 400.0506
LYS 410.0349
TRP 420.0113
LYS 430.0165
PRO 440.0157
LYS 450.0141
MET 460.0240
MET 460.0236
ILE 470.0171
GLY 480.0239
GLY 490.0468
ILE 500.0313
GLY 510.0459
GLY 520.0453
PHE 530.0150
ILE 540.0275
LYS 550.0104
VAL 560.0049
ARG 570.0077
GLN 580.0051
TYR 590.0032
ASP 600.0101
GLN 610.0173
ILE 620.0151
PRO 630.0224
VAL 640.0171
GLU 650.0141
GLU 650.0145
ILE 660.0073
CYS 670.0079
GLY 680.0145
HIS 690.0094
LYS 700.0184
ALA 710.0090
ILE 720.0160
GLY 730.0108
THR 740.0097
VAL 750.0114
LEU 760.0116
VAL 770.0091
GLY 780.0165
PRO 790.0268
THR 800.0292
PRO 810.0396
VAL 820.0316
VAL 820.0319
ASN 830.0155
ILE 840.0043
ILE 850.0110
GLY 860.0231
ARG 870.0242
ASN 880.0253
LEU 890.0164
LEU 900.0156
THR 910.0166
GLN 920.0156
ILE 930.0094
GLY 940.0197
CYS 950.0114
THR 960.0036
LEU 970.0044
ASN 980.0148
PHE 990.0198

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.