CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609383025684

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0586
PRO 10.0257
GLN 20.0279
ILE 30.0221
THR 40.0164
LEU 50.0065
TRP 60.0152
LYS 70.0523
ARG 80.0190
PRO 90.0227
LEU 100.0460
VAL 110.0433
THR 120.0213
ILE 130.0067
ARG 140.0347
ILE 150.0190
GLY 160.0416
GLY 170.0399
GLN 180.0153
LEU 190.0155
LEU 190.0158
LYS 200.0114
GLU 210.0123
GLU 210.0132
ALA 220.0170
LEU 230.0296
LEU 240.0155
ASP 250.0077
THR 260.0118
GLY 270.0281
ALA 280.0364
ASP 290.0440
ASP 300.0136
THR 310.0132
VAL 320.0131
LEU 330.0142
GLU 340.0224
GLU 350.0307
MET 360.0214
ASN 370.0081
LEU 380.0143
PRO 390.0202
GLY 400.0095
LYS 410.0432
TRP 420.0092
LYS 430.0200
PRO 440.0130
LYS 450.0360
MET 460.0289
ILE 470.0131
ILE 470.0129
GLY 480.0296
GLY 490.0586
ILE 500.0255
GLY 510.0286
GLY 520.0181
PHE 530.0242
ILE 540.0260
LYS 550.0331
VAL 560.0173
ARG 570.0058
GLN 580.0118
TYR 590.0091
ASP 600.0186
GLN 610.0351
ILE 620.0131
PRO 630.0116
VAL 640.0045
GLU 650.0155
ILE 660.0120
CYS 670.0259
GLY 680.0136
HIS 690.0108
LYS 700.0117
ALA 710.0095
ILE 720.0136
GLY 730.0103
THR 740.0137
VAL 750.0032
LEU 760.0061
VAL 770.0136
GLY 780.0195
PRO 790.0303
THR 800.0203
PRO 810.0419
VAL 820.0279
VAL 820.0276
ASN 830.0119
ILE 840.0099
ILE 850.0053
GLY 860.0143
ARG 870.0168
ASN 880.0208
LEU 890.0179
LEU 900.0122
THR 910.0074
GLN 920.0116
ILE 930.0081
GLY 940.0116
CYS 950.0069
CYS 950.0067
THR 960.0143
LEU 970.0100
ASN 980.0173
PHE 990.0127
PRO 10.0158
GLN 20.0234
ILE 30.0123
THR 40.0038
LEU 50.0138
TRP 60.0419
LYS 70.0229
ARG 80.0151
PRO 90.0139
LEU 100.0105
VAL 110.0111
THR 120.0217
ILE 130.0137
ARG 140.0100
ILE 150.0156
GLY 160.0292
GLY 170.0404
GLN 180.0109
LEU 190.0134
LYS 200.0140
GLU 210.0209
ALA 220.0083
LEU 230.0141
LEU 240.0086
ASP 250.0063
THR 260.0045
GLY 270.0113
ALA 280.0052
ASP 290.0075
ASP 300.0080
THR 310.0070
VAL 320.0072
VAL 320.0073
LEU 330.0094
GLU 340.0182
GLU 350.0265
MET 360.0198
ASN 370.0166
LEU 380.0121
PRO 390.0141
GLY 400.0306
LYS 410.0551
TRP 420.0137
LYS 430.0093
PRO 440.0170
LYS 450.0190
MET 460.0145
MET 460.0148
ILE 470.0106
GLY 480.0257
GLY 490.0247
ILE 500.0469
GLY 510.0305
GLY 520.0274
PHE 530.0229
ILE 540.0134
LYS 550.0150
VAL 560.0079
ARG 570.0089
GLN 580.0109
TYR 590.0129
ASP 600.0144
GLN 610.0111
ILE 620.0273
PRO 630.0295
VAL 640.0113
GLU 650.0100
GLU 650.0100
ILE 660.0071
CYS 670.0143
GLY 680.0044
HIS 690.0060
LYS 700.0092
ALA 710.0124
ILE 720.0376
GLY 730.0257
THR 740.0166
VAL 750.0096
LEU 760.0036
VAL 770.0054
GLY 780.0179
PRO 790.0276
THR 800.0167
PRO 810.0383
VAL 820.0276
VAL 820.0279
ASN 830.0040
ILE 840.0044
ILE 850.0053
GLY 860.0090
ARG 870.0131
ASN 880.0216
LEU 890.0214
LEU 900.0173
THR 910.0223
GLN 920.0255
ILE 930.0102
GLY 940.0105
CYS 950.0124
THR 960.0133
LEU 970.0137
ASN 980.0137
PHE 990.0128

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.