CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp  ***

<R2> analysis for 2602061609483025715

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0653
PRO 10.0340
GLN 20.0276
ILE 30.0175
THR 40.0183
LEU 50.0193
TRP 60.0301
LYS 70.0252
ARG 80.0121
PRO 90.0080
LEU 100.0072
VAL 110.0061
THR 120.0111
ILE 130.0093
ARG 140.0101
ILE 150.0178
GLY 160.0286
GLY 170.0183
GLN 180.0060
LEU 190.0155
LEU 190.0153
LYS 200.0147
GLU 210.0078
GLU 210.0077
ALA 220.0093
LEU 230.0075
LEU 240.0024
ASP 250.0087
THR 260.0082
GLY 270.0123
ALA 280.0122
ASP 290.0082
ASP 300.0073
THR 310.0129
VAL 320.0052
LEU 330.0082
GLU 340.0081
GLU 350.0082
MET 360.0148
ASN 370.0169
LEU 380.0260
PRO 390.0482
GLY 400.0489
LYS 410.0481
TRP 420.0056
LYS 430.0131
PRO 440.0126
LYS 450.0151
MET 460.0254
ILE 470.0335
ILE 470.0335
GLY 480.0374
GLY 490.0288
ILE 500.0119
GLY 510.0185
GLY 520.0090
PHE 530.0102
ILE 540.0257
LYS 550.0227
VAL 560.0150
ARG 570.0101
GLN 580.0144
TYR 590.0140
ASP 600.0237
GLN 610.0141
ILE 620.0092
PRO 630.0225
VAL 640.0147
GLU 650.0109
ILE 660.0108
CYS 670.0135
GLY 680.0155
HIS 690.0154
LYS 700.0096
ALA 710.0093
ILE 720.0164
GLY 730.0134
THR 740.0242
VAL 750.0224
LEU 760.0103
VAL 770.0090
GLY 780.0040
PRO 790.0202
THR 800.0161
PRO 810.0223
VAL 820.0136
VAL 820.0139
ASN 830.0120
ILE 840.0088
ILE 850.0093
GLY 860.0109
ARG 870.0141
ASN 880.0177
LEU 890.0169
LEU 900.0135
THR 910.0176
GLN 920.0140
ILE 930.0100
GLY 940.0131
CYS 950.0109
CYS 950.0105
THR 960.0112
LEU 970.0068
ASN 980.0150
PHE 990.0139
PRO 10.0653
GLN 20.0370
ILE 30.0096
THR 40.0237
LEU 50.0225
TRP 60.0408
LYS 70.0305
ARG 80.0155
PRO 90.0106
LEU 100.0118
VAL 110.0135
THR 120.0176
ILE 130.0166
ARG 140.0017
ILE 150.0233
GLY 160.0320
GLY 170.0441
GLN 180.0272
LEU 190.0478
LYS 200.0283
GLU 210.0072
ALA 220.0056
LEU 230.0105
LEU 240.0084
ASP 250.0145
THR 260.0113
GLY 270.0096
ALA 280.0171
ASP 290.0207
ASP 300.0123
THR 310.0115
VAL 320.0140
VAL 320.0141
LEU 330.0160
GLU 340.0242
GLU 350.0255
MET 360.0258
ASN 370.0317
LEU 380.0163
PRO 390.0234
GLY 400.0419
LYS 410.0279
TRP 420.0104
LYS 430.0088
PRO 440.0164
LYS 450.0222
MET 460.0305
MET 460.0303
ILE 470.0327
GLY 480.0336
GLY 490.0286
ILE 500.0250
GLY 510.0163
GLY 520.0379
PHE 530.0365
ILE 540.0242
LYS 550.0416
VAL 560.0243
ARG 570.0133
GLN 580.0084
TYR 590.0128
ASP 600.0158
GLN 610.0276
ILE 620.0162
PRO 630.0275
VAL 640.0297
GLU 650.0266
GLU 650.0270
ILE 660.0149
CYS 670.0118
GLY 680.0263
HIS 690.0193
LYS 700.0311
ALA 710.0190
ILE 720.0242
GLY 730.0139
THR 740.0036
VAL 750.0053
LEU 760.0103
VAL 770.0166
GLY 780.0198
PRO 790.0267
THR 800.0235
PRO 810.0248
VAL 820.0236
VAL 820.0236
ASN 830.0206
ILE 840.0156
ILE 850.0135
GLY 860.0184
ARG 870.0226
ASN 880.0213
LEU 890.0240
LEU 900.0247
THR 910.0302
GLN 920.0324
ILE 930.0279
GLY 940.0271
CYS 950.0197
THR 960.0091
LEU 970.0106
ASN 980.0116
PHE 990.0103

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.