CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp_CA  ***

CA distance fluctuations for 2602061614483035571

---  normal mode 11  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ILE 47 1.60 PRO 1 -0.75 LEU 38
ILE 47 1.66 GLN 2 -0.62 LEU 38
ILE 47 1.68 ILE 3 -0.52 LEU 38
GLY 49 1.63 THR 4 -0.45 LYS 45
GLY 49 1.84 LEU 5 -0.52 LYS 45
GLY 49 1.59 TRP 6 -0.55 LYS 43
GLY 49 1.46 LYS 7 -0.65 LYS 45
GLY 49 1.35 ARG 8 -0.82 LYS 45
ILE 47 1.41 PRO 9 -0.72 LYS 45
ILE 47 1.32 LEU 10 -1.05 LYS 45
ILE 47 1.29 VAL 11 -0.88 LYS 45
ILE 47 1.10 THR 12 -0.79 LYS 45
ILE 47 1.04 ILE 13 -0.67 LYS 45
VAL 75 1.52 ARG 14 -0.59 GLY 68
ASP 30 1.46 ILE 15 -0.55 LEU 38
ARG 57 1.41 GLY 16 -0.32 GLY 68
TRP 42 1.78 GLY 17 -0.39 GLY 68
LEU 76 1.62 GLN 18 -0.40 GLY 68
VAL 75 0.95 LEU 19 -0.63 LYS 45
VAL 75 0.96 LEU 19 -0.62 LYS 45
ILE 47 0.83 LYS 20 -0.68 LYS 45
ILE 47 0.95 GLU 21 -0.86 LYS 45
ILE 47 0.95 GLU 21 -0.87 LYS 45
ILE 47 1.08 ALA 22 -0.83 MET 46
ILE 47 1.26 LEU 23 -0.90 LYS 45
ILE 47 1.53 LEU 24 -0.70 LYS 45
ILE 47 1.28 ASP 25 -0.74 ILE 47
PHE 53 1.49 THR 26 -0.62 ILE 47
ILE 54 1.66 GLY 27 -0.71 ILE 47
ILE 54 1.52 ALA 28 -0.80 ILE 47
LYS 55 1.47 ASP 29 -0.64 ILE 47
ILE 15 1.46 ASP 30 -0.71 ILE 47
ILE 15 1.42 THR 31 -0.77 ILE 47
ILE 15 1.26 VAL 32 -0.92 GLY 48
GLN 18 0.93 LEU 33 -0.66 ILE 62
GLY 16 0.68 GLU 34 -0.74 ILE 62
GLY 16 0.63 GLU 35 -1.02 ILE 62
PRO 81 0.41 MET 36 -1.38 TRP 42
GLN 18 0.32 ASN 37 -1.41 ASP 60
GLY 78 0.46 LEU 38 -1.18 LYS 70
GLY 78 0.35 PRO 39 -0.98 GLN 92
GLY 17 0.79 GLY 40 -0.95 ILE 72
GLY 17 1.58 LYS 41 -1.19 MET 36
GLY 17 1.78 TRP 42 -1.38 MET 36
GLY 17 1.34 LYS 43 -0.92 MET 36
GLY 16 1.23 PRO 44 -0.64 ASN 37
LYS 7 1.57 LYS 45 -0.48 ASN 37
LEU 5 1.83 MET 46 -0.30 ASN 37
LEU 97 1.80 ILE 47 -0.16 ASN 37
LEU 97 1.80 ILE 47 -0.16 ASN 37
LEU 97 1.86 GLY 48 -0.21 ASN 37
LEU 5 1.84 GLY 49 -0.33 GLN 58
ARG 87 1.81 ILE 50 -0.48 LEU 76
ALA 28 1.77 GLY 51 -0.22 LEU 76
LEU 23 1.85 GLY 52 -0.22 ASN 37
PRO 9 1.82 PHE 53 -0.22 ASN 37
GLY 27 1.66 ILE 54 -0.27 ASN 37
ASP 29 1.47 LYS 55 -0.39 ASN 37
GLY 16 1.35 VAL 56 -0.49 ASN 37
GLY 16 1.41 ARG 57 -0.91 MET 36
GLN 18 1.50 GLN 58 -1.00 ASN 37
GLN 18 1.44 TYR 59 -1.18 MET 36
GLY 17 1.24 ASP 60 -1.41 ASN 37
GLY 17 0.76 GLN 61 -1.37 MET 36
GLY 17 0.69 ILE 62 -1.22 MET 36
ILE 47 0.63 PRO 63 -0.94 MET 36
ILE 47 0.87 VAL 64 -0.82 LEU 38
ILE 47 0.96 GLU 65 -0.88 LEU 38
ILE 47 1.14 ILE 66 -0.74 LEU 38
ILE 47 1.17 CYS 67 -0.72 LYS 45
ILE 47 1.03 GLY 68 -0.87 LEU 38
ILE 47 1.06 HIS 69 -1.01 LEU 38
ILE 47 0.93 LYS 70 -1.18 LEU 38
MET 46 0.88 ALA 71 -1.07 LEU 38
LYS 45 0.76 ILE 72 -1.02 LEU 38
LYS 45 0.89 GLY 73 -1.03 ASN 37
ILE 15 1.42 THR 74 -1.12 ASN 37
ARG 14 1.52 VAL 75 -0.81 ASN 37
GLN 18 1.62 LEU 76 -0.94 GLY 49
GLN 18 1.23 VAL 77 -0.72 VAL 75
GLY 16 1.12 GLY 78 -0.48 THR 80
GLY 16 1.02 PRO 79 -0.38 ILE 62
GLY 16 0.83 THR 80 -0.48 GLY 78
GLY 16 0.68 PRO 81 -0.74 MET 46
ARG 8 0.64 VAL 82 -0.95 MET 46
ARG 8 0.63 VAL 82 -0.96 MET 46
ILE 47 0.76 ASN 83 -0.81 MET 46
ILE 47 0.96 ILE 84 -0.92 ILE 47
ILE 47 1.15 ILE 85 -0.76 ILE 47
LYS 45 1.22 GLY 86 -0.73 ILE 47
LYS 45 1.56 ARG 87 -0.60 ASN 37
LYS 45 1.52 ASN 88 -0.79 ASN 37
LYS 45 1.23 LEU 89 -0.70 ASN 37
MET 46 1.40 LEU 90 -0.64 LEU 38
MET 46 1.49 THR 91 -0.81 PRO 39
MET 46 1.22 GLN 92 -1.00 LEU 38
ILE 47 1.21 ILE 93 -1.01 LEU 38
MET 46 1.37 GLY 94 -0.96 LEU 38
MET 46 1.53 CYS 95 -0.73 PRO 39
MET 46 1.52 CYS 95 -0.73 PRO 39
MET 46 1.66 THR 96 -0.65 PRO 39
GLY 48 1.69 LEU 97 -0.52 PRO 39
GLY 48 1.64 ASN 98 -0.52 PRO 39
GLY 48 1.51 PHE 99 -0.44 PRO 39
GLY 48 1.33 PRO 1 -0.54 PRO 39
MET 46 1.43 GLN 2 -0.61 PRO 39
MET 46 1.59 ILE 3 -0.55 PRO 39
MET 46 1.68 THR 4 -0.64 PRO 39
MET 46 1.83 LEU 5 -0.57 PRO 39
MET 46 1.53 TRP 6 -0.66 ASN 37
LYS 45 1.57 LYS 7 -0.54 ASN 37
PHE 53 1.57 ARG 8 -0.46 ASN 37
PHE 53 1.82 PRO 9 -0.38 ILE 47
PHE 53 1.62 LEU 10 -0.44 ILE 47
GLY 52 1.52 VAL 11 -0.34 ILE 47
GLY 52 1.33 THR 12 -0.30 ILE 47
GLY 52 1.29 ILE 13 -0.24 ILE 47
PRO 39 1.20 ARG 14 -0.35 ASN 83
PRO 39 1.23 ILE 15 -0.63 ASN 83
PRO 39 1.13 GLY 16 -1.25 GLU 35
PRO 39 1.58 GLY 17 -0.87 MET 36
PRO 39 1.56 GLN 18 -0.50 PRO 81
PRO 39 1.25 LEU 19 -0.30 ILE 47
GLY 52 1.15 LYS 20 -0.33 ILE 47
GLY 52 1.34 GLU 21 -0.39 ILE 47
GLY 52 1.59 ALA 22 -0.45 ILE 47
GLY 52 1.85 LEU 23 -0.52 ILE 47
GLY 52 1.77 LEU 24 -0.43 ILE 47
GLY 52 1.51 ASP 25 -0.51 ILE 47
GLY 49 1.46 THR 26 -0.55 LYS 45
ILE 50 1.40 GLY 27 -0.71 ILE 47
GLY 51 1.77 ALA 28 -0.71 LYS 45
GLY 51 1.48 ASP 29 -0.79 LYS 45
GLY 51 1.44 ASP 30 -0.58 GLY 16
GLY 51 1.30 THR 31 -0.67 GLY 16
GLY 52 1.07 VAL 32 -0.82 GLY 16
GLY 52 1.07 VAL 32 -0.83 GLY 16
GLY 52 1.07 LEU 33 -1.08 GLY 16
GLY 52 0.90 GLU 34 -1.21 GLY 16
GLY 16 0.77 GLU 35 -1.25 GLY 16
GLY 16 0.73 MET 36 -1.21 GLY 16
LEU 19 0.77 ASN 37 -0.55 ARG 57
LYS 20 1.12 LEU 38 -0.18 ARG 57
GLY 17 1.58 PRO 39 -0.29 LYS 55
GLN 18 1.00 GLY 40 -0.26 LEU 10
GLN 18 0.56 LYS 41 -0.49 LEU 10
GLY 52 0.47 TRP 42 -0.56 LEU 10
GLY 16 0.30 LYS 43 -0.81 LEU 10
GLY 16 0.38 PRO 44 -0.84 LEU 10
GLY 16 0.35 LYS 45 -1.05 LEU 10
GLY 16 0.45 MET 46 -0.96 LEU 10
GLY 16 0.45 MET 46 -0.94 LEU 10
GLY 16 0.46 ILE 47 -0.95 THR 80
GLY 16 0.54 GLY 48 -0.92 VAL 32
ASP 29 0.99 GLY 49 -0.94 LEU 76
ALA 28 1.43 ILE 50 -0.63 LEU 76
ALA 28 1.44 GLY 51 -0.17 ASN 37
GLY 16 0.95 GLY 52 -0.46 PRO 81
GLY 16 0.78 PHE 53 -0.66 PRO 81
GLY 16 0.83 ILE 54 -0.53 GLY 16
GLY 16 0.71 LYS 55 -0.65 GLY 16
GLY 16 0.67 VAL 56 -0.75 GLY 16
GLY 16 0.58 ARG 57 -0.60 GLY 16
GLY 52 0.56 GLN 58 -0.61 LEU 10
GLY 52 0.69 TYR 59 -0.45 MET 36
ILE 50 0.80 ASP 60 -0.41 MET 36
ILE 50 0.90 GLN 61 -0.43 MET 36
GLY 52 0.86 ILE 62 -0.43 MET 36
GLY 52 0.93 PRO 63 -0.36 MET 36
GLY 52 1.06 VAL 64 -0.23 ILE 85
GLY 52 1.14 GLU 65 -0.19 PRO 39
GLY 52 1.13 GLU 65 -0.19 PRO 39
GLY 52 1.32 ILE 66 -0.21 PRO 39
GLY 52 1.31 CYS 67 -0.23 PRO 39
GLY 52 1.15 GLY 68 -0.23 PRO 39
GLY 48 1.16 HIS 69 -0.25 PRO 39
GLY 52 1.05 LYS 70 -0.22 PRO 39
ILE 50 1.08 ALA 71 -0.19 MET 36
ILE 50 1.05 ILE 72 -0.27 MET 36
ILE 50 1.10 GLY 73 -0.32 MET 36
ILE 50 1.03 THR 74 -0.43 GLY 16
GLY 52 0.96 VAL 75 -0.72 GLY 16
GLY 52 0.82 LEU 76 -0.77 GLY 16
GLY 52 0.74 VAL 77 -1.04 GLY 16
GLY 16 0.74 GLY 78 -0.94 GLY 16
GLY 16 0.87 PRO 79 -0.92 GLY 16
GLY 16 0.87 THR 80 -0.95 ILE 47
LYS 55 1.14 PRO 81 -0.85 GLY 16
ILE 54 1.14 VAL 82 -0.77 ILE 47
ILE 54 1.15 VAL 82 -0.77 ILE 47
GLY 52 1.34 ASN 83 -0.82 GLY 16
GLY 52 1.48 ILE 84 -0.67 GLY 16
GLY 52 1.54 ILE 85 -0.50 GLY 16
GLY 51 1.55 GLY 86 -0.47 GLY 16
ILE 50 1.81 ARG 87 -0.48 LYS 45
ILE 50 1.65 ASN 88 -0.38 LYS 45
ILE 50 1.45 LEU 89 -0.26 LYS 45
GLY 49 1.50 LEU 90 -0.31 LYS 45
GLY 49 1.59 THR 91 -0.31 LYS 45
GLY 49 1.35 GLN 92 -0.24 PRO 39
GLY 49 1.30 ILE 93 -0.31 PRO 39
GLY 49 1.45 GLY 94 -0.33 PRO 39
GLY 48 1.60 CYS 95 -0.38 PRO 39
GLY 48 1.82 THR 96 -0.43 PRO 39
GLY 48 1.86 LEU 97 -0.50 PRO 39
ILE 47 1.74 ASN 98 -0.65 PRO 39

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.