CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVpca  ***

CA strain for 2602061614543035880

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 -0.0002
GLN 2ILE 3 -0.0001
ILE 3THR 4 0.0154
THR 4LEU 5 -0.0000
LEU 5TRP 6 -0.0002
TRP 6LYS 7 -0.1101
LYS 7ARG 8 0.0001
ARG 8PRO 9 -0.0004
PRO 9LEU 10 -0.1716
LEU 10VAL 11 -0.0000
VAL 11THR 12 0.0001
THR 12ILE 13 0.2016
ILE 13ARG 14 0.0000
ARG 14ILE 15 0.0006
ILE 15GLY 16 0.0088
GLY 16GLY 17 0.0002
GLY 17GLN 18 -0.0001
GLN 18LEU 19 -0.0249
LEU 19LEU 19 0.0289
LEU 19LYS 20 -0.0001
LYS 20GLU 21 0.0957
GLU 21GLU 21 0.0031
GLU 21ALA 22 0.0000
ALA 22LEU 23 0.3384
LEU 23LEU 24 -0.0001
LEU 24ASP 25 -0.0001
ASP 25THR 26 0.2377
THR 26GLY 27 0.0000
GLY 27ALA 28 0.0003
ALA 28ASP 29 0.0814
ASP 29ASP 30 0.0002
ASP 30THR 31 -0.0001
THR 31VAL 32 -0.2237
VAL 32LEU 33 -0.0004
LEU 33GLU 34 0.0000
GLU 34GLU 35 -0.1131
GLU 35MET 36 0.0001
MET 36ASN 37 0.0000
ASN 37LEU 38 0.0000
LEU 38PRO 39 0.0001
PRO 39GLY 40 0.0000
GLY 40LYS 41 -0.2731
LYS 41TRP 42 -0.0000
TRP 42LYS 43 -0.0000
LYS 43PRO 44 0.1146
PRO 44LYS 45 0.0000
LYS 45MET 46 -0.0002
MET 46ILE 47 0.0136
ILE 47ILE 47 0.0047
ILE 47GLY 48 -0.0002
GLY 48GLY 49 0.0483
GLY 49ILE 50 -0.0000
ILE 50GLY 51 0.0000
GLY 51GLY 52 -0.0682
GLY 52PHE 53 0.0002
PHE 53ILE 54 -0.0001
ILE 54LYS 55 -0.0641
LYS 55VAL 56 -0.0001
VAL 56ARG 57 0.0001
ARG 57GLN 58 0.1631
GLN 58TYR 59 -0.0001
TYR 59ASP 60 -0.0001
ASP 60GLN 61 -0.4559
GLN 61ILE 62 -0.0000
ILE 62PRO 63 -0.0003
PRO 63VAL 64 -0.3733
VAL 64GLU 65 -0.0002
GLU 65ILE 66 -0.0002
ILE 66CYS 67 -0.1196
CYS 67GLY 68 0.0001
GLY 68HIS 69 0.0001
HIS 69LYS 70 0.2096
LYS 70ALA 71 -0.0001
ALA 71ILE 72 -0.0003
ILE 72GLY 73 -0.2097
GLY 73THR 74 0.0001
THR 74VAL 75 0.0001
VAL 75LEU 76 0.1695
LEU 76VAL 77 0.0002
VAL 77GLY 78 -0.0001
GLY 78PRO 79 -0.1620
PRO 79THR 80 0.0000
THR 80PRO 81 -0.0002
PRO 81VAL 82 0.0966
VAL 82VAL 82 -0.0025
VAL 82ASN 83 0.0000
ASN 83ILE 84 0.3296
ILE 84ILE 85 0.0003
ILE 85GLY 86 0.0001
GLY 86ARG 87 -0.0384
ARG 87ASN 88 0.0000
ASN 88LEU 89 0.0004
LEU 89LEU 90 -0.0906
LEU 90THR 91 0.0002
THR 91GLN 92 -0.0002
GLN 92ILE 93 -0.3393
ILE 93GLY 94 -0.0001
GLY 94CYS 95 0.0000
CYS 95CYS 95 -0.0003
CYS 95THR 96 -0.1761
THR 96LEU 97 -0.0001
LEU 97ASN 98 -0.0003
ASN 98PHE 99 0.0002
PHE 99PRO 1 -0.0477
PRO 1GLN 2 0.0001
GLN 2ILE 3 -0.0001
ILE 3THR 4 0.0714
THR 4LEU 5 -0.0000
LEU 5TRP 6 0.0000
TRP 6LYS 7 -0.1139
LYS 7ARG 8 0.0001
ARG 8PRO 9 -0.0002
PRO 9LEU 10 -0.2006
LEU 10VAL 11 -0.0000
VAL 11THR 12 0.0001
THR 12ILE 13 -0.0054
ILE 13ARG 14 0.0002
ARG 14ILE 15 -0.0001
ILE 15GLY 16 0.0235
GLY 16GLY 17 -0.0000
GLY 17GLN 18 0.0001
GLN 18LEU 19 -0.0557
LEU 19LYS 20 -0.0001
LYS 20GLU 21 -0.0001
GLU 21ALA 22 -0.0400
ALA 22LEU 23 0.0001
LEU 23LEU 24 -0.0002
LEU 24ASP 25 0.0960
ASP 25THR 26 -0.0002
THR 26GLY 27 0.0001
GLY 27ALA 28 0.2986
ALA 28ASP 29 -0.0003
ASP 29ASP 30 -0.0001
ASP 30THR 31 0.0441
THR 31VAL 32 0.0001
VAL 32VAL 32 -0.0029
VAL 32LEU 33 0.0316
LEU 33GLU 34 -0.0000
GLU 34GLU 35 -0.0002
GLU 35MET 36 -0.0153
MET 36ASN 37 -0.0001
ASN 37LEU 38 0.0000
LEU 38PRO 39 -0.0508
PRO 39GLY 40 0.0000
GLY 40LYS 41 0.0000
LYS 41TRP 42 -0.0680
TRP 42LYS 43 -0.0000
LYS 43PRO 44 -0.0000
PRO 44LYS 45 0.1092
LYS 45MET 46 0.0001
MET 46MET 46 0.0071
MET 46ILE 47 -0.0844
ILE 47GLY 48 0.0002
GLY 48GLY 49 -0.0001
GLY 49ILE 50 0.0233
ILE 50GLY 51 -0.0001
GLY 51GLY 52 -0.0001
GLY 52PHE 53 0.0836
PHE 53ILE 54 -0.0000
ILE 54LYS 55 -0.0002
LYS 55VAL 56 -0.1189
VAL 56ARG 57 -0.0002
ARG 57GLN 58 -0.0003
GLN 58TYR 59 0.0526
TYR 59ASP 60 -0.0003
ASP 60GLN 61 0.0001
GLN 61ILE 62 0.0883
ILE 62PRO 63 0.0001
PRO 63VAL 64 -0.0003
VAL 64GLU 65 -0.0570
GLU 65GLU 65 0.0013
GLU 65ILE 66 -0.0000
ILE 66CYS 67 -0.0686
CYS 67GLY 68 0.0003
GLY 68HIS 69 -0.0000
HIS 69LYS 70 0.1317
LYS 70ALA 71 -0.0002
ALA 71ILE 72 0.0000
ILE 72GLY 73 -0.0894
GLY 73THR 74 0.0001
THR 74VAL 75 -0.0000
VAL 75LEU 76 -0.0829
LEU 76VAL 77 0.0001
VAL 77GLY 78 -0.0001
GLY 78PRO 79 0.0505
PRO 79THR 80 -0.0000
THR 80PRO 81 -0.0000
PRO 81VAL 82 0.0888
VAL 82VAL 82 0.0097
VAL 82ASN 83 0.0001
ASN 83ILE 84 0.2163
ILE 84ILE 85 -0.0004
ILE 85GLY 86 0.0001
GLY 86ARG 87 -0.0626
ARG 87ASN 88 0.0002
ASN 88LEU 89 0.0002
LEU 89LEU 90 -0.0160
LEU 90THR 91 0.0000
THR 91GLN 92 0.0002
GLN 92ILE 93 -0.1814
ILE 93GLY 94 -0.0003
GLY 94CYS 95 0.0004
CYS 95THR 96 -0.1935
THR 96LEU 97 0.0002
LEU 97ASN 98 -0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.