CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVpca  ***

CA strain for 2602061614543035880

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 0.0003
GLN 2ILE 3 -0.0004
ILE 3THR 4 -0.0294
THR 4LEU 5 0.0002
LEU 5TRP 6 0.0001
TRP 6LYS 7 0.0672
LYS 7ARG 8 0.0004
ARG 8PRO 9 -0.0002
PRO 9LEU 10 0.1977
LEU 10VAL 11 -0.0002
VAL 11THR 12 -0.0003
THR 12ILE 13 0.3214
ILE 13ARG 14 -0.0000
ARG 14ILE 15 0.0001
ILE 15GLY 16 0.0179
GLY 16GLY 17 0.0000
GLY 17GLN 18 0.0001
GLN 18LEU 19 -0.0348
LEU 19LEU 19 -0.0004
LEU 19LYS 20 0.0001
LYS 20GLU 21 0.3608
GLU 21GLU 21 -0.0048
GLU 21ALA 22 0.0001
ALA 22LEU 23 0.1707
LEU 23LEU 24 0.0001
LEU 24ASP 25 -0.0003
ASP 25THR 26 0.0330
THR 26GLY 27 0.0002
GLY 27ALA 28 -0.0002
ALA 28ASP 29 0.0505
ASP 29ASP 30 -0.0001
ASP 30THR 31 -0.0001
THR 31VAL 32 0.2311
VAL 32LEU 33 -0.0001
LEU 33GLU 34 -0.0002
GLU 34GLU 35 0.0429
GLU 35MET 36 -0.0000
MET 36ASN 37 -0.0001
ASN 37LEU 38 -0.0035
LEU 38PRO 39 -0.0003
PRO 39GLY 40 0.0003
GLY 40LYS 41 -0.0344
LYS 41TRP 42 0.0000
TRP 42LYS 43 -0.0000
LYS 43PRO 44 -0.0156
PRO 44LYS 45 -0.0001
LYS 45MET 46 -0.0001
MET 46ILE 47 -0.0250
ILE 47ILE 47 -0.0025
ILE 47GLY 48 -0.0004
GLY 48GLY 49 -0.0283
GLY 49ILE 50 -0.0001
ILE 50GLY 51 -0.0000
GLY 51GLY 52 0.0757
GLY 52PHE 53 -0.0001
PHE 53ILE 54 -0.0002
ILE 54LYS 55 0.2295
LYS 55VAL 56 0.0001
VAL 56ARG 57 0.0001
ARG 57GLN 58 0.2567
GLN 58TYR 59 0.0000
TYR 59ASP 60 0.0001
ASP 60GLN 61 -0.0264
GLN 61ILE 62 0.0001
ILE 62PRO 63 0.0001
PRO 63VAL 64 -0.3237
VAL 64GLU 65 -0.0002
GLU 65ILE 66 0.0003
ILE 66CYS 67 -0.0173
CYS 67GLY 68 0.0000
GLY 68HIS 69 0.0002
HIS 69LYS 70 0.1886
LYS 70ALA 71 -0.0001
ALA 71ILE 72 -0.0001
ILE 72GLY 73 -0.0617
GLY 73THR 74 -0.0001
THR 74VAL 75 -0.0001
VAL 75LEU 76 0.1752
LEU 76VAL 77 -0.0003
VAL 77GLY 78 0.0001
GLY 78PRO 79 -0.2044
PRO 79THR 80 0.0002
THR 80PRO 81 -0.0001
PRO 81VAL 82 -0.2435
VAL 82VAL 82 -0.0050
VAL 82ASN 83 -0.0002
ASN 83ILE 84 -0.0065
ILE 84ILE 85 0.0000
ILE 85GLY 86 -0.0001
GLY 86ARG 87 0.0455
ARG 87ASN 88 -0.0003
ASN 88LEU 89 0.0003
LEU 89LEU 90 0.0796
LEU 90THR 91 -0.0002
THR 91GLN 92 0.0001
GLN 92ILE 93 0.0512
ILE 93GLY 94 -0.0001
GLY 94CYS 95 0.0001
CYS 95CYS 95 -0.0020
CYS 95THR 96 0.0174
THR 96LEU 97 -0.0004
LEU 97ASN 98 -0.0002
ASN 98PHE 99 -0.0001
PHE 99PRO 1 0.0403
PRO 1GLN 2 0.0003
GLN 2ILE 3 -0.0002
ILE 3THR 4 0.0041
THR 4LEU 5 0.0001
LEU 5TRP 6 -0.0002
TRP 6LYS 7 0.0947
LYS 7ARG 8 0.0001
ARG 8PRO 9 -0.0000
PRO 9LEU 10 0.3526
LEU 10VAL 11 -0.0002
VAL 11THR 12 -0.0001
THR 12ILE 13 -0.0758
ILE 13ARG 14 0.0001
ARG 14ILE 15 -0.0002
ILE 15GLY 16 -0.0466
GLY 16GLY 17 0.0001
GLY 17GLN 18 -0.0001
GLN 18LEU 19 0.0286
LEU 19LYS 20 0.0005
LYS 20GLU 21 0.0000
GLU 21ALA 22 0.0017
ALA 22LEU 23 0.0001
LEU 23LEU 24 0.0005
LEU 24ASP 25 -0.0908
ASP 25THR 26 0.0000
THR 26GLY 27 0.0001
GLY 27ALA 28 -0.2665
ALA 28ASP 29 -0.0004
ASP 29ASP 30 -0.0003
ASP 30THR 31 0.0347
THR 31VAL 32 -0.0002
VAL 32VAL 32 -0.0033
VAL 32LEU 33 -0.1217
LEU 33GLU 34 0.0002
GLU 34GLU 35 -0.0003
GLU 35MET 36 0.3222
MET 36ASN 37 0.0001
ASN 37LEU 38 -0.0002
LEU 38PRO 39 0.0549
PRO 39GLY 40 0.0002
GLY 40LYS 41 -0.0000
LYS 41TRP 42 0.0820
TRP 42LYS 43 -0.0000
LYS 43PRO 44 0.0001
PRO 44LYS 45 0.0374
LYS 45MET 46 -0.0001
MET 46MET 46 0.0016
MET 46ILE 47 0.0642
ILE 47GLY 48 0.0001
GLY 48GLY 49 -0.0002
GLY 49ILE 50 -0.0061
ILE 50GLY 51 0.0004
GLY 51GLY 52 -0.0000
GLY 52PHE 53 -0.0756
PHE 53ILE 54 0.0002
ILE 54LYS 55 -0.0002
LYS 55VAL 56 0.1184
VAL 56ARG 57 0.0000
ARG 57GLN 58 -0.0000
GLN 58TYR 59 0.1597
TYR 59ASP 60 0.0003
ASP 60GLN 61 -0.0001
GLN 61ILE 62 -0.1547
ILE 62PRO 63 0.0001
PRO 63VAL 64 -0.0002
VAL 64GLU 65 0.0880
GLU 65GLU 65 0.0011
GLU 65ILE 66 0.0000
ILE 66CYS 67 0.0946
CYS 67GLY 68 -0.0003
GLY 68HIS 69 0.0001
HIS 69LYS 70 -0.1063
LYS 70ALA 71 -0.0001
ALA 71ILE 72 -0.0002
ILE 72GLY 73 -0.0234
GLY 73THR 74 0.0001
THR 74VAL 75 0.0004
VAL 75LEU 76 0.1939
LEU 76VAL 77 -0.0000
VAL 77GLY 78 0.0003
GLY 78PRO 79 -0.1526
PRO 79THR 80 -0.0003
THR 80PRO 81 0.0001
PRO 81VAL 82 -0.1518
VAL 82VAL 82 -0.0059
VAL 82ASN 83 0.0004
ASN 83ILE 84 -0.0423
ILE 84ILE 85 0.0003
ILE 85GLY 86 0.0000
GLY 86ARG 87 -0.0295
ARG 87ASN 88 0.0001
ASN 88LEU 89 -0.0003
LEU 89LEU 90 0.0849
LEU 90THR 91 -0.0002
THR 91GLN 92 -0.0001
GLN 92ILE 93 0.1996
ILE 93GLY 94 0.0003
GLY 94CYS 95 0.0000
CYS 95THR 96 0.1007
THR 96LEU 97 -0.0001
LEU 97ASN 98 -0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.