CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVpca  ***

<R2> analysis for 2602061614543035880

---  normal mode 26  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2190
PRO 10.1789
GLN 20.1121
ILE 30.0887
THR 40.0454
LEU 50.0354
TRP 60.0297
LYS 70.0275
ARG 80.0389
PRO 90.0510
LEU 100.0716
VAL 110.0762
THR 120.0683
ILE 130.0403
ARG 140.0128
ILE 150.0404
GLY 160.0723
GLY 170.0341
GLN 180.0386
LEU 190.0781
LEU 190.0772
LYS 200.0946
GLU 210.0659
GLU 210.0666
ALA 220.0197
LEU 230.0203
LEU 240.0334
ASP 250.0460
THR 260.0299
GLY 270.0325
ALA 280.0283
ASP 290.0227
ASP 300.0229
THR 310.0259
VAL 320.0284
LEU 330.0364
GLU 340.0479
GLU 350.0959
MET 360.0823
ASN 370.1387
LEU 380.0736
PRO 390.1181
GLY 400.1225
LYS 410.1116
TRP 420.0691
LYS 430.0910
PRO 440.0849
LYS 450.0649
MET 460.0417
ILE 470.1008
ILE 470.1015
GLY 480.0886
GLY 490.0307
ILE 500.0301
GLY 510.0724
GLY 520.0907
PHE 530.0658
ILE 540.0208
LYS 550.0398
VAL 560.0671
ARG 570.0711
GLN 580.0696
TYR 590.0736
ASP 600.0518
GLN 610.0450
ILE 620.0467
PRO 630.0478
VAL 640.0219
GLU 650.0455
ILE 660.0728
CYS 670.1182
GLY 680.1182
HIS 690.0901
LYS 700.0535
ALA 710.0260
ILE 720.0461
GLY 730.0426
THR 740.0526
VAL 750.0707
LEU 760.0515
VAL 770.0403
GLY 780.0386
PRO 790.0285
THR 800.0261
PRO 810.0271
VAL 820.0674
VAL 820.0677
ASN 830.0523
ILE 840.0269
ILE 850.0251
GLY 860.0249
ARG 870.0269
ASN 880.0286
LEU 890.0339
LEU 900.0468
THR 910.0557
GLN 920.0452
ILE 930.0461
GLY 940.0558
CYS 950.0581
CYS 950.0576
THR 960.0800
LEU 970.0884
ASN 980.0818
PHE 990.0844
PRO 10.2116
GLN 20.1348
ILE 30.0910
THR 40.0634
LEU 50.0557
TRP 60.0687
LYS 70.0797
ARG 80.0396
PRO 90.0402
LEU 100.0604
VAL 110.0544
THR 120.0513
ILE 130.0855
ARG 140.0917
ILE 150.0987
GLY 160.0910
GLY 170.0892
GLN 180.0990
LEU 190.0690
LYS 200.0424
GLU 210.0431
ALA 220.0537
LEU 230.0373
LEU 240.0325
ASP 250.0249
THR 260.0234
GLY 270.0217
ALA 280.0347
ASP 290.0520
ASP 300.0538
THR 310.0557
VAL 320.0674
VAL 320.0681
LEU 330.0608
GLU 340.0605
GLU 350.0773
MET 360.0750
ASN 370.1161
LEU 380.0620
PRO 390.1117
GLY 400.1130
LYS 410.2190
TRP 420.0477
LYS 430.0596
PRO 440.0364
LYS 450.0473
MET 460.0771
MET 460.0750
ILE 470.0736
GLY 480.0976
GLY 490.0766
ILE 500.0503
GLY 510.0631
GLY 520.1181
PHE 530.1106
ILE 540.0800
LYS 550.0708
VAL 560.0649
ARG 570.0470
GLN 580.0530
TYR 590.0792
ASP 600.0401
GLN 610.0662
ILE 620.1070
PRO 630.0568
VAL 640.0467
GLU 650.0582
GLU 650.0606
ILE 660.0788
CYS 670.1011
GLY 680.0853
HIS 690.0250
LYS 700.0214
ALA 710.0427
ILE 720.0663
GLY 730.0489
THR 740.0447
VAL 750.0829
LEU 760.0939
VAL 770.0853
GLY 780.0795
PRO 790.0938
THR 800.0549
PRO 810.0311
VAL 820.0286
VAL 820.0292
ASN 830.0133
ILE 840.0220
ILE 850.0355
GLY 860.0391
ARG 870.0461
ASN 880.0513
LEU 890.0514
LEU 900.0480
THR 910.0272
GLN 920.0289
ILE 930.0481
GLY 940.0548
CYS 950.0657
THR 960.0788
LEU 970.0690
ASN 980.0622
PHE 990.0618

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.