CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVpca  ***

<R2> analysis for 2602061614543035880

---  normal mode 63  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2184
PRO 10.0718
GLN 20.0341
ILE 30.1085
THR 40.0657
LEU 50.0467
TRP 60.0451
LYS 70.0895
ARG 80.0564
PRO 90.0498
LEU 100.0114
VAL 110.0072
THR 120.0160
ILE 130.0389
ARG 140.0310
ILE 150.0251
GLY 160.0933
GLY 170.0474
GLN 180.0541
LEU 190.0204
LEU 190.0199
LYS 200.0121
GLU 210.0104
GLU 210.0104
ALA 220.0101
LEU 230.0049
LEU 240.0115
ASP 250.0059
THR 260.0233
GLY 270.0280
ALA 280.0360
ASP 290.0746
ASP 300.0590
THR 310.0576
VAL 320.0546
LEU 330.0348
GLU 340.0190
GLU 350.1665
MET 360.1112
ASN 370.1496
LEU 380.0316
PRO 390.1515
GLY 400.1093
LYS 410.0931
TRP 420.0979
LYS 430.0857
PRO 440.0925
LYS 450.0476
MET 460.0333
ILE 470.0228
ILE 470.0227
GLY 480.0167
GLY 490.0100
ILE 500.0167
GLY 510.0322
GLY 520.0451
PHE 530.0230
ILE 540.0334
LYS 550.0291
VAL 560.0427
ARG 570.0699
GLN 580.0682
TYR 590.0733
ASP 600.0777
GLN 610.1015
ILE 620.0631
PRO 630.0308
VAL 640.0348
GLU 650.0309
ILE 660.0304
CYS 670.0640
GLY 680.0448
HIS 690.0967
LYS 700.0289
ALA 710.0158
ILE 720.0387
GLY 730.0626
THR 740.0734
VAL 750.0855
LEU 760.0773
VAL 770.0875
GLY 780.0844
PRO 790.0265
THR 800.0340
PRO 810.0295
VAL 820.0164
VAL 820.0156
ASN 830.0190
ILE 840.0174
ILE 850.0244
GLY 860.0317
ARG 870.0508
ASN 880.0871
LEU 890.0834
LEU 900.0523
THR 910.0191
GLN 920.0248
ILE 930.0595
GLY 940.0664
CYS 950.0710
CYS 950.0697
THR 960.0118
LEU 970.0187
ASN 980.0172
PHE 990.0158
PRO 10.0499
GLN 20.0385
ILE 30.0906
THR 40.0751
LEU 50.0555
TRP 60.0774
LYS 70.1323
ARG 80.0429
PRO 90.0600
LEU 100.0390
VAL 110.0643
THR 120.0907
ILE 130.0770
ARG 140.0844
ILE 150.2082
GLY 160.1673
GLY 170.1468
GLN 180.1246
LEU 190.0294
LYS 200.1100
GLU 210.0835
ALA 220.0570
LEU 230.0580
LEU 240.0594
ASP 250.0291
THR 260.0241
GLY 270.0302
ALA 280.0821
ASP 290.1014
ASP 300.0432
THR 310.0349
VAL 320.0783
VAL 320.0780
LEU 330.0576
GLU 340.0252
GLU 350.0306
MET 360.1275
ASN 370.0980
LEU 380.0851
PRO 390.0769
GLY 400.0289
LYS 410.0389
TRP 420.0126
LYS 430.0845
PRO 440.0735
LYS 450.0453
MET 460.0774
MET 460.0797
ILE 470.0955
GLY 480.0353
GLY 490.0310
ILE 500.0456
GLY 510.0489
GLY 520.0752
PHE 530.0191
ILE 540.0911
LYS 550.0681
VAL 560.0589
ARG 570.0399
GLN 580.0498
TYR 590.0570
ASP 600.0271
GLN 610.0218
ILE 620.0490
PRO 630.0522
VAL 640.0576
GLU 650.1032
GLU 650.1023
ILE 660.0858
CYS 670.1220
GLY 680.0786
HIS 690.0761
LYS 700.0330
ALA 710.0642
ILE 720.0311
GLY 730.0288
THR 740.0101
VAL 750.0197
LEU 760.0189
VAL 770.0286
GLY 780.0291
PRO 790.0242
THR 800.0544
PRO 810.0845
VAL 820.2133
VAL 820.2184
ASN 830.0660
ILE 840.1055
ILE 850.0816
GLY 860.0280
ARG 870.0738
ASN 880.1046
LEU 890.1197
LEU 900.0689
THR 910.0327
GLN 920.0111
ILE 930.1010
GLY 940.0877
CYS 950.0553
THR 960.0347
LEU 970.0193
ASN 980.0391
PHE 990.0741

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.