CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVpca  ***

CA distance fluctuations for 2602061614543035880

---  normal mode 7  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
PRO 39 0.94 PRO 1 -0.04 LYS 45
PRO 39 0.92 GLN 2 -0.04 LYS 45
ASN 37 0.94 ILE 3 -0.05 LYS 45
ASN 37 1.05 THR 4 -0.05 LYS 45
ASN 37 1.07 LEU 5 -0.06 LYS 45
ASN 37 1.25 TRP 6 -0.07 LYS 45
ASN 37 1.16 LYS 7 -0.07 LYS 45
ASN 37 1.00 ARG 8 -0.07 LYS 45
ASN 37 0.91 PRO 9 -0.06 LYS 45
LEU 38 0.92 LEU 10 -0.05 LYS 45
LEU 38 0.97 VAL 11 -0.04 LYS 45
LEU 38 1.05 THR 12 -0.04 LYS 45
LEU 38 1.00 ILE 13 -0.03 GLY 48
LEU 38 1.03 ARG 14 -0.05 GLY 40
LEU 38 0.98 ILE 15 -0.11 GLY 40
LEU 38 0.99 GLY 16 -0.13 GLY 40
LEU 38 1.08 GLY 17 -0.08 GLY 40
LEU 38 1.11 GLN 18 -0.06 GLY 40
LEU 38 1.13 LEU 19 -0.03 MET 46
LEU 38 1.13 LEU 19 -0.03 MET 46
LEU 38 1.07 LYS 20 -0.03 MET 46
LEU 38 1.02 GLU 21 -0.04 MET 46
LEU 38 1.02 GLU 21 -0.04 MET 46
LEU 38 0.91 ALA 22 -0.05 GLY 40
LEU 38 0.82 LEU 23 -0.06 GLY 48
LEU 38 0.75 LEU 24 -0.06 GLY 40
LEU 38 0.65 ASP 25 -0.15 GLY 40
LEU 38 0.56 THR 26 -0.18 GLY 40
LEU 38 0.50 GLY 27 -0.29 GLY 40
LEU 38 0.54 ALA 28 -0.33 GLY 40
LEU 38 0.50 ASP 29 -0.37 GLY 40
LEU 38 0.58 ASP 30 -0.34 GLY 40
LEU 38 0.69 THR 31 -0.27 GLY 40
LEU 38 0.72 VAL 32 -0.28 GLY 40
LEU 38 0.82 LEU 33 -0.22 GLY 40
LEU 38 0.85 GLU 34 -0.21 GLY 40
LEU 38 0.87 GLU 35 -0.23 GLY 40
LEU 38 0.94 MET 36 -0.19 GLY 40
LEU 38 0.94 ASN 37 -0.20 GLY 40
LEU 38 0.90 LEU 38 -0.21 GLY 40
LEU 38 0.88 PRO 39 -0.21 GLY 40
LEU 38 0.80 GLY 40 -0.25 GLY 40
LEU 38 0.72 LYS 41 -0.30 GLY 40
LEU 38 0.68 TRP 42 -0.34 GLY 40
LEU 38 0.59 LYS 43 -0.40 GLY 40
LEU 38 0.56 PRO 44 -0.44 GLY 40
LEU 38 0.51 LYS 45 -0.49 GLY 40
LEU 38 0.47 MET 46 -0.54 GLY 40
LEU 38 0.47 ILE 47 -0.54 GLY 40
LEU 38 0.47 ILE 47 -0.54 GLY 40
LEU 38 0.42 GLY 48 -0.59 GLY 40
LEU 38 0.45 GLY 49 -0.53 GLY 40
LEU 38 0.41 ILE 50 -0.56 GLY 40
LEU 38 0.42 GLY 51 -0.59 GLY 40
LEU 38 0.39 GLY 52 -0.67 GLY 40
LEU 38 0.43 PHE 53 -0.62 GLY 40
LEU 38 0.52 ILE 54 -0.52 GLY 40
LEU 38 0.56 LYS 55 -0.48 GLY 40
LEU 38 0.63 VAL 56 -0.41 GLY 40
LEU 38 0.67 ARG 57 -0.37 GLY 40
LEU 38 0.64 GLN 58 -0.36 GLY 40
LEU 38 0.71 TYR 59 -0.31 GLY 40
LEU 38 0.67 ASP 60 -0.30 GLY 40
LEU 38 0.71 GLN 61 -0.25 GLY 40
LEU 38 0.79 ILE 62 -0.21 GLY 40
LEU 38 0.85 PRO 63 -0.15 GLY 40
LEU 38 0.89 VAL 64 -0.12 GLY 40
LEU 38 0.94 GLU 65 -0.05 GLY 40
LEU 38 0.92 ILE 66 -0.03 LYS 45
LEU 38 0.97 CYS 67 -0.04 PRO 1
LEU 38 0.99 GLY 68 -0.03 LYS 45
LEU 38 0.89 HIS 69 -0.03 LYS 45
LEU 38 0.86 LYS 70 -0.07 GLY 40
LEU 38 0.79 ALA 71 -0.13 GLY 40
LEU 38 0.76 ILE 72 -0.18 GLY 40
LEU 38 0.69 GLY 73 -0.24 GLY 40
LEU 38 0.67 THR 74 -0.29 GLY 40
LEU 38 0.73 VAL 75 -0.27 GLY 40
LEU 38 0.69 LEU 76 -0.33 GLY 40
LEU 38 0.76 VAL 77 -0.30 GLY 40
LEU 38 0.73 GLY 78 -0.33 GLY 40
LEU 38 0.72 PRO 79 -0.32 GLY 40
LEU 38 0.71 THR 80 -0.30 GLY 40
LEU 38 0.75 PRO 81 -0.22 GLY 40
LEU 38 0.82 VAL 82 -0.14 GLY 40
LEU 38 0.82 VAL 82 -0.14 GLY 40
LEU 38 0.84 ASN 83 -0.15 GLY 40
LEU 38 0.76 ILE 84 -0.18 GLY 40
LEU 38 0.74 ILE 85 -0.16 GLY 40
LEU 38 0.64 GLY 86 -0.24 GLY 40
LEU 38 0.57 ARG 87 -0.25 GLY 40
LEU 38 0.59 ASN 88 -0.27 GLY 40
LEU 38 0.69 LEU 89 -0.19 GLY 40
LEU 38 0.67 LEU 90 -0.14 GLY 40
PRO 39 0.67 THR 91 -0.17 GLY 40
PRO 39 0.71 GLN 92 -0.15 GLY 40
PRO 39 0.77 ILE 93 -0.07 GLY 40
PRO 39 0.80 GLY 94 -0.06 GLY 40
PRO 39 0.76 CYS 95 -0.05 GLY 40
PRO 39 0.77 CYS 95 -0.05 GLY 40
PRO 39 0.75 THR 96 -0.04 GLY 40
PRO 39 0.72 LEU 97 -0.03 CYS 67
PRO 39 0.79 ASN 98 -0.04 GLY 68
ASN 37 0.80 PHE 99 -0.04 HIS 69
PRO 39 0.78 PRO 1 -0.07 GLY 68
PRO 39 0.78 GLN 2 -0.05 CYS 67
PRO 39 0.68 ILE 3 -0.10 GLY 40
PRO 39 0.67 THR 4 -0.15 GLY 40
PRO 39 0.61 LEU 5 -0.21 GLY 40
PRO 39 0.58 TRP 6 -0.27 GLY 40
PRO 39 0.49 LYS 7 -0.34 GLY 40
PRO 39 0.45 ARG 8 -0.36 GLY 40
PRO 39 0.51 PRO 9 -0.27 GLY 40
PRO 39 0.43 LEU 10 -0.35 GLY 40
PRO 39 0.45 VAL 11 -0.27 GLY 40
PRO 39 0.40 THR 12 -0.28 GLY 40
ASN 37 0.40 ILE 13 -0.23 LYS 41
ASN 37 0.38 ARG 14 -0.23 LYS 41
ASN 37 0.42 ILE 15 -0.29 LYS 41
MET 36 0.50 GLY 16 -0.32 LYS 41
MET 36 0.38 GLY 17 -0.27 LYS 41
MET 36 0.32 GLN 18 -0.44 GLY 40
PRO 39 0.25 LEU 19 -0.41 GLY 40
PRO 39 0.24 LYS 20 -0.51 GLY 40
PRO 39 0.30 GLU 21 -0.49 GLY 40
PRO 39 0.34 ALA 22 -0.41 GLY 40
PRO 39 0.41 LEU 23 -0.33 GLY 40
ASN 37 0.57 LEU 24 -0.17 GLY 40
ASN 37 0.62 ASP 25 -0.16 GLY 40
ASN 37 0.76 THR 26 -0.06 ILE 47
ASN 37 0.70 GLY 27 -0.12 GLY 40
ASN 37 0.73 ALA 28 -0.12 GLY 40
ASN 37 0.91 ASP 29 -0.10 LYS 45
ASN 37 0.86 ASP 30 -0.09 LYS 45
ASN 37 0.71 THR 31 -0.13 GLY 40
ASN 37 0.50 VAL 32 -0.36 GLY 40
ASN 37 0.50 VAL 32 -0.36 GLY 40
ASN 37 0.32 LEU 33 -0.55 GLY 40
GLY 16 0.29 GLU 34 -0.81 GLY 40
GLY 16 0.35 GLU 35 -0.98 GLY 40
GLY 16 0.50 MET 36 -0.97 LYS 41
TRP 6 1.25 ASN 37 -0.00 MET 36
LEU 19 1.13 LEU 38 -0.08 GLY 17
PRO 1 0.94 PRO 39 -0.00 MET 36
GLN 61 0.51 GLY 40 -0.98 GLU 35
ASN 37 0.62 LYS 41 -0.97 MET 36
ASN 37 0.57 TRP 42 -0.07 GLN 58
ASN 37 0.61 LYS 43 -0.04 ASP 29
ASN 37 0.50 PRO 44 -0.23 GLY 40
ASN 37 0.57 LYS 45 -0.21 GLY 40
ASN 37 0.50 MET 46 -0.31 GLY 40
ASN 37 0.50 MET 46 -0.31 GLY 40
ASN 37 0.55 ILE 47 -0.29 GLY 40
LEU 38 0.56 GLY 48 -0.32 GLY 40
LEU 38 0.57 GLY 49 -0.35 GLY 40
LEU 38 0.57 ILE 50 -0.42 GLY 40
LEU 38 0.51 GLY 51 -0.52 GLY 40
LEU 38 0.53 GLY 52 -0.47 GLY 40
LEU 38 0.48 PHE 53 -0.47 GLY 40
LEU 38 0.37 ILE 54 -0.58 GLY 40
LEU 38 0.33 LYS 55 -0.56 GLY 40
ASN 37 0.37 VAL 56 -0.50 GLY 40
ASN 37 0.43 ARG 57 -0.43 LYS 41
ASN 37 0.65 GLN 58 -0.10 GLY 40
ASN 37 0.70 TYR 59 -0.04 LYS 41
ASN 37 0.92 ASP 60 -0.03 LYS 20
ASN 37 0.99 GLN 61 -0.03 LYS 20
ASN 37 0.78 ILE 62 -0.05 LYS 20
ASN 37 0.76 PRO 63 -0.05 GLY 16
ASN 37 0.67 VAL 64 -0.08 LYS 41
ASN 37 0.63 GLU 65 -0.07 LYS 41
ASN 37 0.61 GLU 65 -0.08 LYS 41
ASN 37 0.60 ILE 66 -0.10 LYS 41
PRO 39 0.54 CYS 67 -0.10 LYS 41
ASN 37 0.57 GLY 68 -0.07 GLY 16
ASN 37 0.75 HIS 69 -0.06 GLY 16
ASN 37 0.82 LYS 70 -0.08 GLY 16
ASN 37 0.94 ALA 71 -0.02 GLY 16
ASN 37 1.00 ILE 72 -0.04 PRO 63
ASN 37 1.05 GLY 73 -0.03 LYS 20
ASN 37 0.94 THR 74 -0.03 TRP 42
ASN 37 0.71 VAL 75 -0.13 LYS 41
ASN 37 0.57 LEU 76 -0.27 GLY 40
GLY 16 0.35 VAL 77 -0.58 LYS 41
GLY 16 0.29 GLY 78 -0.75 GLY 40
GLY 16 0.24 PRO 79 -0.89 GLY 40
LEU 38 0.26 THR 80 -0.73 GLY 40
LEU 38 0.22 PRO 81 -0.79 GLY 40
LEU 38 0.24 VAL 82 -0.66 GLY 40
LEU 38 0.24 VAL 82 -0.66 GLY 40
ASN 37 0.27 ASN 83 -0.54 GLY 40
ASN 37 0.46 ILE 84 -0.35 GLY 40
ASN 37 0.64 ILE 85 -0.16 GLY 40
ASN 37 0.79 GLY 86 -0.06 LYS 45
ASN 37 0.97 ARG 87 -0.07 LYS 45
ASN 37 1.09 ASN 88 -0.06 LYS 45
ASN 37 0.98 LEU 89 -0.04 LYS 45
ASN 37 0.93 LEU 90 -0.04 LYS 45
ASN 37 1.12 THR 91 -0.05 LYS 45
ASN 37 1.12 GLN 92 -0.04 LYS 45
ASN 37 0.94 ILE 93 -0.03 LYS 45
ASN 37 0.99 GLY 94 -0.03 LYS 45
ASN 37 0.89 CYS 95 -0.04 LYS 45
ASN 37 0.89 THR 96 -0.04 LYS 45
ASN 37 0.79 LEU 97 -0.04 LYS 45
PRO 39 0.86 ASN 98 -0.04 LYS 45

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.