CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVpca  ***

CA strain for 2602061614543035880

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 -0.0003
GLN 2ILE 3 -0.0000
ILE 3THR 4 0.0321
THR 4LEU 5 -0.0003
LEU 5TRP 6 0.0001
TRP 6LYS 7 -0.0951
LYS 7ARG 8 0.0001
ARG 8PRO 9 0.0001
PRO 9LEU 10 -0.2994
LEU 10VAL 11 -0.0001
VAL 11THR 12 0.0001
THR 12ILE 13 0.0796
ILE 13ARG 14 -0.0002
ARG 14ILE 15 0.0001
ILE 15GLY 16 -0.0048
GLY 16GLY 17 0.0001
GLY 17GLN 18 0.0000
GLN 18LEU 19 -0.0476
LEU 19LEU 19 0.0042
LEU 19LYS 20 -0.0000
LYS 20GLU 21 0.0907
GLU 21GLU 21 0.0025
GLU 21ALA 22 0.0000
ALA 22LEU 23 0.0921
LEU 23LEU 24 0.0002
LEU 24ASP 25 0.0003
ASP 25THR 26 -0.1040
THR 26GLY 27 0.0001
GLY 27ALA 28 -0.0001
ALA 28ASP 29 -0.0860
ASP 29ASP 30 0.0002
ASP 30THR 31 -0.0002
THR 31VAL 32 0.1873
VAL 32LEU 33 0.0002
LEU 33GLU 34 0.0000
GLU 34GLU 35 0.0695
GLU 35MET 36 -0.0005
MET 36ASN 37 -0.0001
ASN 37LEU 38 0.1092
LEU 38PRO 39 0.0000
PRO 39GLY 40 0.0000
GLY 40LYS 41 0.0536
LYS 41TRP 42 -0.0000
TRP 42LYS 43 -0.0001
LYS 43PRO 44 -0.0250
PRO 44LYS 45 -0.0001
LYS 45MET 46 0.0004
MET 46ILE 47 0.0064
ILE 47ILE 47 0.0003
ILE 47GLY 48 0.0002
GLY 48GLY 49 -0.0331
GLY 49ILE 50 -0.0002
ILE 50GLY 51 -0.0001
GLY 51GLY 52 -0.0072
GLY 52PHE 53 0.0000
PHE 53ILE 54 -0.0000
ILE 54LYS 55 0.1978
LYS 55VAL 56 0.0005
VAL 56ARG 57 0.0002
ARG 57GLN 58 0.0196
GLN 58TYR 59 -0.0000
TYR 59ASP 60 0.0000
ASP 60GLN 61 -0.0017
GLN 61ILE 62 -0.0000
ILE 62PRO 63 0.0001
PRO 63VAL 64 -0.0201
VAL 64GLU 65 -0.0001
GLU 65ILE 66 -0.0002
ILE 66CYS 67 -0.1494
CYS 67GLY 68 0.0000
GLY 68HIS 69 -0.0002
HIS 69LYS 70 0.1263
LYS 70ALA 71 0.0000
ALA 71ILE 72 0.0001
ILE 72GLY 73 0.0766
GLY 73THR 74 0.0002
THR 74VAL 75 0.0002
VAL 75LEU 76 0.0786
LEU 76VAL 77 0.0001
VAL 77GLY 78 -0.0002
GLY 78PRO 79 0.0722
PRO 79THR 80 0.0000
THR 80PRO 81 -0.0001
PRO 81VAL 82 0.0333
VAL 82VAL 82 0.0075
VAL 82ASN 83 0.0002
ASN 83ILE 84 -0.1207
ILE 84ILE 85 0.0000
ILE 85GLY 86 0.0001
GLY 86ARG 87 0.1429
ARG 87ASN 88 -0.0000
ASN 88LEU 89 -0.0000
LEU 89LEU 90 -0.2417
LEU 90THR 91 0.0002
THR 91GLN 92 0.0001
GLN 92ILE 93 -0.2428
ILE 93GLY 94 0.0001
GLY 94CYS 95 -0.0003
CYS 95CYS 95 -0.0009
CYS 95THR 96 -0.0115
THR 96LEU 97 -0.0000
LEU 97ASN 98 0.0002
ASN 98PHE 99 0.0002
PHE 99PRO 1 -0.0016
PRO 1GLN 2 0.0004
GLN 2ILE 3 -0.0004
ILE 3THR 4 0.0371
THR 4LEU 5 0.0002
LEU 5TRP 6 0.0002
TRP 6LYS 7 -0.1309
LYS 7ARG 8 -0.0001
ARG 8PRO 9 -0.0002
PRO 9LEU 10 -0.2807
LEU 10VAL 11 -0.0001
VAL 11THR 12 0.0002
THR 12ILE 13 0.0498
ILE 13ARG 14 -0.0001
ARG 14ILE 15 -0.0001
ILE 15GLY 16 0.0421
GLY 16GLY 17 -0.0001
GLY 17GLN 18 0.0012
GLN 18LEU 19 -0.1072
LEU 19LYS 20 -0.0002
LYS 20GLU 21 0.0001
GLU 21ALA 22 -0.1126
ALA 22LEU 23 -0.0000
LEU 23LEU 24 -0.0002
LEU 24ASP 25 0.0716
ASP 25THR 26 0.0000
THR 26GLY 27 -0.0001
GLY 27ALA 28 0.0606
ALA 28ASP 29 -0.0001
ASP 29ASP 30 0.0003
ASP 30THR 31 0.0577
THR 31VAL 32 -0.0000
VAL 32VAL 32 0.0013
VAL 32LEU 33 0.0736
LEU 33GLU 34 -0.0001
GLU 34GLU 35 -0.0000
GLU 35MET 36 -0.1593
MET 36ASN 37 0.0001
ASN 37LEU 38 -0.0000
LEU 38PRO 39 -0.0358
PRO 39GLY 40 -0.0002
GLY 40LYS 41 0.0001
LYS 41TRP 42 -0.0755
TRP 42LYS 43 0.0000
LYS 43PRO 44 0.0001
PRO 44LYS 45 0.0459
LYS 45MET 46 -0.0001
MET 46MET 46 0.0038
MET 46ILE 47 0.0662
ILE 47GLY 48 -0.0002
GLY 48GLY 49 0.0001
GLY 49ILE 50 0.0571
ILE 50GLY 51 0.0001
GLY 51GLY 52 -0.0001
GLY 52PHE 53 -0.0766
PHE 53ILE 54 -0.0003
ILE 54LYS 55 0.0001
LYS 55VAL 56 -0.0227
VAL 56ARG 57 -0.0002
ARG 57GLN 58 0.0001
GLN 58TYR 59 -0.0921
TYR 59ASP 60 -0.0000
ASP 60GLN 61 -0.0001
GLN 61ILE 62 -0.0155
ILE 62PRO 63 0.0000
PRO 63VAL 64 0.0001
VAL 64GLU 65 -0.1409
GLU 65GLU 65 0.0003
GLU 65ILE 66 0.0003
ILE 66CYS 67 -0.1479
CYS 67GLY 68 -0.0000
GLY 68HIS 69 0.0001
HIS 69LYS 70 0.1765
LYS 70ALA 71 0.0001
ALA 71ILE 72 -0.0001
ILE 72GLY 73 0.0480
GLY 73THR 74 -0.0001
THR 74VAL 75 0.0000
VAL 75LEU 76 0.1962
LEU 76VAL 77 0.0002
VAL 77GLY 78 -0.0001
GLY 78PRO 79 0.0562
PRO 79THR 80 0.0000
THR 80PRO 81 -0.0003
PRO 81VAL 82 -0.0496
VAL 82VAL 82 -0.0011
VAL 82ASN 83 -0.0000
ASN 83ILE 84 -0.0182
ILE 84ILE 85 -0.0002
ILE 85GLY 86 0.0000
GLY 86ARG 87 0.0216
ARG 87ASN 88 0.0000
ASN 88LEU 89 -0.0002
LEU 89LEU 90 -0.1736
LEU 90THR 91 0.0001
THR 91GLN 92 -0.0001
GLN 92ILE 93 -0.1759
ILE 93GLY 94 0.0000
GLY 94CYS 95 -0.0001
CYS 95THR 96 0.0034
THR 96LEU 97 0.0000
LEU 97ASN 98 0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.