CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVpca  ***

<R2> analysis for 2602061614543035880

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2109
PRO 10.0398
GLN 20.0309
ILE 30.0263
THR 40.0358
LEU 50.0332
TRP 60.0411
LYS 70.0397
ARG 80.0298
PRO 90.0187
LEU 100.0329
VAL 110.0503
THR 120.0684
ILE 130.0645
ARG 140.0741
ILE 150.0709
GLY 160.1035
GLY 170.1124
GLN 180.1019
LEU 190.0797
LEU 190.0797
LYS 200.0699
GLU 210.0573
GLU 210.0572
ALA 220.0320
LEU 230.0238
LEU 240.0214
ASP 250.0109
THR 260.0125
GLY 270.0172
ALA 280.0214
ASP 290.0319
ASP 300.0318
THR 310.0236
VAL 320.0198
LEU 330.0271
GLU 340.0498
GLU 350.0778
MET 360.1018
ASN 370.1228
LEU 380.0680
PRO 390.0540
GLY 400.0740
LYS 410.0634
TRP 420.0808
LYS 430.1278
PRO 440.1663
LYS 450.1562
MET 460.1570
ILE 470.1270
ILE 470.1280
GLY 480.1147
GLY 490.0874
ILE 500.0676
GLY 510.0515
GLY 520.0959
PHE 530.1203
ILE 540.1102
LYS 550.1320
VAL 560.0934
ARG 570.0860
GLN 580.0641
TYR 590.0333
ASP 600.0505
GLN 610.0632
ILE 620.0452
PRO 630.0640
VAL 640.0553
GLU 650.0737
ILE 660.0664
CYS 670.0828
GLY 680.0880
HIS 690.0850
LYS 700.0838
ALA 710.0709
ILE 720.0697
GLY 730.0583
THR 740.0473
VAL 750.0290
LEU 760.0339
VAL 770.0410
GLY 780.0652
PRO 790.0711
THR 800.0306
PRO 810.0348
VAL 820.0318
VAL 820.0321
ASN 830.0234
ILE 840.0132
ILE 850.0216
GLY 860.0248
ARG 870.0360
ASN 880.0430
LEU 890.0421
LEU 900.0362
THR 910.0494
GLN 920.0640
ILE 930.0661
GLY 940.0536
CYS 950.0304
CYS 950.0301
THR 960.0304
LEU 970.0294
ASN 980.0351
PHE 990.0446
PRO 10.0463
GLN 20.0352
ILE 30.0279
THR 40.0303
LEU 50.0315
TRP 60.0456
LYS 70.0369
ARG 80.0308
PRO 90.0214
LEU 100.0560
VAL 110.0698
THR 120.0866
ILE 130.0783
ARG 140.0915
ILE 150.0926
GLY 160.1428
GLY 170.1378
GLN 180.1185
LEU 190.0922
LYS 200.0897
GLU 210.0736
ALA 220.0482
LEU 230.0374
LEU 240.0308
ASP 250.0109
THR 260.0087
GLY 270.0058
ALA 280.0105
ASP 290.0227
ASP 300.0192
THR 310.0047
VAL 320.0169
VAL 320.0170
LEU 330.0260
GLU 340.0483
GLU 350.0684
MET 360.0969
ASN 370.0819
LEU 380.1481
PRO 390.2109
GLY 400.1512
LYS 410.2076
TRP 420.1140
LYS 430.1150
PRO 440.0937
LYS 450.0721
MET 460.0511
MET 460.0512
ILE 470.0389
GLY 480.0282
GLY 490.0310
ILE 500.0500
GLY 510.0682
GLY 520.0415
PHE 530.0296
ILE 540.0342
LYS 550.0545
VAL 560.0572
ARG 570.0729
GLN 580.0647
TYR 590.0503
ASP 600.0436
GLN 610.0432
ILE 620.0276
PRO 630.0636
VAL 640.0621
GLU 650.0832
GLU 650.0848
ILE 660.0780
CYS 670.0987
GLY 680.1065
HIS 690.0984
LYS 700.0929
ALA 710.0713
ILE 720.0562
GLY 730.0393
THR 740.0324
VAL 750.0205
LEU 760.0363
VAL 770.0470
GLY 780.0534
PRO 790.0641
THR 800.0516
PRO 810.0709
VAL 820.0475
VAL 820.0478
ASN 830.0285
ILE 840.0221
ILE 850.0197
GLY 860.0118
ARG 870.0273
ASN 880.0342
LEU 890.0368
LEU 900.0375
THR 910.0506
GLN 920.0662
ILE 930.0757
GLY 940.0650
CYS 950.0390
THR 960.0350
LEU 970.0310
ASN 980.0314
PHE 990.0359

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.