CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp_CA  ***

CA distance fluctuations for 2602061615123036985

---  normal mode 10  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
MET 36 0.24 PRO 1 -1.48 CYS 67
MET 36 0.31 GLN 2 -1.36 CYS 67
MET 36 0.41 ILE 3 -0.99 GLY 49
MET 36 0.45 THR 4 -0.97 GLY 49
MET 36 0.51 LEU 5 -1.08 GLY 49
MET 36 0.60 TRP 6 -1.00 ILE 50
MET 36 0.71 LYS 7 -1.07 ILE 50
MET 36 0.68 ARG 8 -1.23 GLY 49
MET 36 0.61 PRO 9 -1.09 GLY 49
MET 36 0.79 LEU 10 -0.94 GLY 49
MET 36 0.96 VAL 11 -1.04 PRO 1
MET 36 1.10 THR 12 -1.27 PRO 1
VAL 77 0.93 ILE 13 -1.08 PRO 1
VAL 77 1.72 ARG 14 -0.81 PRO 1
VAL 56 1.35 ILE 15 -0.62 LEU 38
GLY 48 1.89 GLY 16 -0.33 PRO 1
MET 46 1.81 GLY 17 -0.46 PRO 1
LYS 55 1.80 GLN 18 -0.52 PRO 1
VAL 77 1.54 LEU 19 -0.78 PRO 1
GLY 78 1.56 LEU 19 -0.78 PRO 1
GLU 35 1.57 LYS 20 -0.79 PRO 1
MET 36 1.03 GLU 21 -0.82 PRO 1
MET 36 1.03 GLU 21 -0.81 PRO 1
MET 36 0.67 ALA 22 -0.71 PRO 1
MET 36 0.55 LEU 23 -0.95 ILE 50
ILE 93 0.46 LEU 24 -1.09 GLY 49
ILE 15 0.55 ASP 25 -1.33 GLY 49
ILE 15 0.53 THR 26 -1.47 GLY 48
ILE 15 0.69 GLY 27 -1.76 GLY 48
ILE 15 0.83 ALA 28 -1.54 ILE 47
ILE 15 0.85 ASP 29 -1.50 ILE 47
ILE 15 0.98 ASP 30 -1.02 ILE 47
ILE 15 0.92 THR 31 -0.80 ILE 47
ILE 15 1.19 VAL 32 -0.44 ILE 47
LYS 20 1.02 LEU 33 -0.51 LYS 41
LYS 20 1.52 GLU 34 -0.80 LYS 41
LYS 20 1.57 GLU 35 -1.16 LYS 41
THR 12 1.10 MET 36 -1.41 LYS 41
LEU 19 0.46 ASN 37 -0.90 LYS 43
LYS 55 0.96 LEU 38 -1.02 LYS 70
LYS 55 0.62 PRO 39 -0.94 LYS 70
ARG 14 0.84 GLY 40 -1.24 MET 36
ILE 62 1.00 LYS 41 -1.41 MET 36
ARG 14 0.96 TRP 42 -1.05 MET 36
GLN 18 1.29 LYS 43 -0.90 ASN 37
GLN 18 1.42 PRO 44 -0.84 LYS 7
GLY 17 1.69 LYS 45 -1.19 LYS 7
GLY 17 1.81 MET 46 -1.38 ASP 29
GLY 16 1.70 ILE 47 -1.54 ALA 28
GLY 16 1.71 ILE 47 -1.52 GLY 27
GLY 16 1.89 GLY 48 -1.76 GLY 27
GLY 16 1.58 GLY 49 -1.67 ASP 25
GLY 16 1.39 ILE 50 -1.86 ALA 28
GLY 16 1.42 GLY 51 -1.46 ALA 28
GLY 16 1.68 GLY 52 -1.28 ILE 84
GLY 16 1.66 PHE 53 -1.33 GLY 27
GLN 18 1.71 ILE 54 -1.08 ALA 28
GLN 18 1.80 LYS 55 -0.86 ASP 29
GLN 18 1.56 VAL 56 -0.71 ASP 29
ARG 14 1.52 ARG 57 -0.67 TRP 42
ILE 15 1.26 GLN 58 -0.63 ASN 37
ARG 14 1.08 TYR 59 -0.70 MET 36
ILE 15 0.68 ASP 60 -0.62 MET 36
LYS 41 0.72 GLN 61 -0.55 MET 36
LYS 41 1.00 ILE 62 -0.70 ALA 22
LYS 41 0.82 PRO 63 -0.79 LEU 38
VAL 75 1.11 VAL 64 -0.81 LEU 38
VAL 77 0.79 GLU 65 -1.02 PRO 1
MET 36 0.65 ILE 66 -1.33 PRO 1
MET 36 0.87 CYS 67 -1.48 PRO 1
MET 36 0.75 GLY 68 -1.12 PRO 1
GLY 40 0.58 HIS 69 -0.91 LEU 38
GLY 40 0.61 LYS 70 -1.02 LEU 38
LYS 41 0.58 ALA 71 -0.85 LEU 38
LYS 41 0.70 ILE 72 -0.78 LEU 38
LYS 41 0.57 GLY 73 -0.61 PRO 39
ILE 15 0.83 THR 74 -0.51 ASN 37
VAL 64 1.11 VAL 75 -0.45 PRO 1
ARG 14 1.49 LEU 76 -0.50 TRP 42
ARG 14 1.72 VAL 77 -0.75 TRP 42
LEU 19 1.56 GLY 78 -0.54 TRP 42
GLN 18 1.20 PRO 79 -0.54 LYS 41
ILE 15 1.23 THR 80 -0.54 ILE 84
ILE 15 0.90 PRO 81 -0.41 PRO 1
VAL 32 0.95 VAL 82 -0.44 ILE 62
VAL 32 0.95 VAL 82 -0.45 ILE 62
ALA 28 0.75 ASN 83 -0.60 ILE 62
ILE 15 0.73 ILE 84 -0.84 ILE 50
ILE 15 0.60 ILE 85 -0.91 ILE 47
ILE 15 0.69 GLY 86 -1.24 ILE 47
ILE 15 0.55 ARG 87 -1.30 ILE 47
ILE 15 0.57 ASN 88 -1.00 ILE 47
VAL 64 0.48 LEU 89 -0.86 ILE 47
ASP 25 0.34 LEU 90 -1.00 ILE 47
ILE 15 0.26 THR 91 -1.00 ILE 47
LYS 41 0.33 GLN 92 -0.84 PRO 39
LEU 24 0.46 ILE 93 -0.90 PRO 39
PRO 9 0.35 GLY 94 -0.88 PRO 39
PRO 9 0.31 CYS 95 -0.95 ILE 47
PRO 9 0.33 CYS 95 -0.94 ILE 47
MET 36 0.19 THR 96 -1.03 ILE 47
MET 36 0.25 LEU 97 -1.04 GLY 48
MET 36 0.26 ASN 98 -0.89 GLY 48
PRO 9 0.32 PHE 99 -0.81 GLY 48
GLN 2 0.28 PRO 1 -1.31 CYS 67
GLN 2 0.28 GLN 2 -0.97 CYS 67
ILE 15 0.24 ILE 3 -1.07 GLY 48
ILE 15 0.27 THR 4 -1.06 ILE 47
ILE 15 0.37 LEU 5 -1.23 ILE 47
ILE 15 0.40 TRP 6 -1.13 MET 46
ILE 15 0.47 LYS 7 -1.36 MET 46
ILE 15 0.57 ARG 8 -1.39 ILE 47
ILE 15 0.45 PRO 9 -1.37 GLY 48
GLY 16 0.52 LEU 10 -1.17 GLY 48
GLY 16 0.46 VAL 11 -0.99 GLY 48
MET 36 0.59 THR 12 -0.77 GLY 48
MET 36 0.75 ILE 13 -0.68 GLY 48
MET 36 1.19 ARG 14 -0.76 PRO 39
MET 36 1.21 ILE 15 -1.10 PRO 39
ARG 57 1.45 GLY 16 -1.22 PRO 39
MET 36 1.18 GLY 17 -0.55 PRO 39
MET 36 1.62 GLN 18 -0.81 PRO 39
MET 36 1.16 LEU 19 -0.67 LEU 38
MET 36 0.84 LYS 20 -0.67 LEU 38
GLY 16 0.67 GLU 21 -0.82 PHE 53
GLY 16 0.66 ALA 22 -0.99 GLY 52
ILE 15 0.63 LEU 23 -1.32 GLY 48
ILE 15 0.47 LEU 24 -1.36 GLY 48
ILE 15 0.55 ASP 25 -1.67 GLY 49
ILE 15 0.45 THR 26 -1.59 GLY 49
ILE 15 0.61 GLY 27 -1.54 GLY 49
VAL 82 0.92 ALA 28 -1.86 ILE 50
VAL 82 0.82 ASP 29 -1.43 ILE 50
VAL 82 0.86 ASP 30 -1.20 ILE 50
VAL 82 0.84 THR 31 -0.97 ILE 50
VAL 82 0.95 VAL 32 -0.89 GLY 52
VAL 82 0.95 VAL 32 -0.89 GLY 52
GLY 16 0.83 LEU 33 -0.81 GLY 52
GLY 16 0.90 GLU 34 -0.77 GLY 52
GLN 18 1.26 GLU 35 -0.88 LYS 41
GLN 18 1.62 MET 36 -1.13 LYS 41
GLN 18 1.29 ASN 37 -1.12 LYS 41
PRO 44 1.27 LEU 38 -0.76 GLN 18
PRO 44 0.90 PRO 39 -1.22 GLY 16
GLY 16 0.60 GLY 40 -0.72 ASN 37
GLN 61 0.72 LYS 41 -1.13 MET 36
LEU 38 1.06 TRP 42 -1.11 ASN 37
LEU 38 1.25 LYS 43 -0.73 ASN 37
LEU 38 1.27 PRO 44 -0.57 ASP 29
LEU 38 0.95 LYS 45 -0.84 ASP 29
GLY 16 0.96 MET 46 -1.05 ASP 29
GLY 16 0.95 MET 46 -1.05 ASP 29
GLY 16 0.94 ILE 47 -1.29 ASP 29
GLY 16 1.05 GLY 48 -1.16 ARG 8
GLY 16 1.10 GLY 49 -1.23 ARG 8
GLY 16 1.29 ILE 50 -1.29 GLY 27
GLY 16 1.44 GLY 51 -1.11 GLY 27
GLY 16 1.24 GLY 52 -0.95 GLY 27
GLY 16 1.16 PHE 53 -0.96 ASP 29
GLY 16 1.11 ILE 54 -0.95 ASP 29
GLY 16 1.01 LYS 55 -0.78 ASP 29
GLY 16 1.25 VAL 56 -0.68 ASP 30
GLY 16 1.45 ARG 57 -0.74 ASN 37
GLY 16 0.99 GLN 58 -0.78 ASN 37
GLY 16 0.80 TYR 59 -0.79 ASN 37
VAL 82 0.64 ASP 60 -0.56 ASN 37
LYS 41 0.72 GLN 61 -0.50 PRO 39
VAL 82 0.57 ILE 62 -0.68 PRO 39
MET 36 0.54 PRO 63 -0.82 PRO 39
MET 36 0.69 VAL 64 -0.77 PRO 39
MET 36 0.70 GLU 65 -0.72 PRO 1
MET 36 0.72 GLU 65 -0.72 PRO 1
MET 36 0.58 ILE 66 -0.85 PRO 1
MET 36 0.52 CYS 67 -1.31 PRO 1
MET 36 0.55 GLY 68 -1.09 PRO 1
MET 36 0.49 HIS 69 -0.90 PRO 1
MET 36 0.51 LYS 70 -0.64 PRO 39
VAL 82 0.45 ALA 71 -0.63 GLY 48
VAL 82 0.52 ILE 72 -0.62 PRO 39
VAL 82 0.61 GLY 73 -0.58 ILE 50
VAL 82 0.70 THR 74 -0.59 ILE 50
VAL 82 0.76 VAL 75 -0.62 GLY 52
GLY 16 0.92 LEU 76 -0.72 ASN 37
GLY 16 1.26 VAL 77 -0.77 ASN 37
GLY 16 1.21 GLY 78 -0.62 LYS 41
GLY 16 1.03 PRO 79 -0.63 GLY 52
GLY 16 1.05 THR 80 -0.97 GLY 52
GLY 16 1.02 PRO 81 -1.08 GLY 52
ILE 15 0.94 VAL 82 -1.06 GLY 52
ILE 15 0.95 VAL 82 -1.06 GLY 52
GLY 16 0.82 ASN 83 -1.02 GLY 52
VAL 82 0.77 ILE 84 -1.28 GLY 52
VAL 82 0.64 ILE 85 -1.08 GLY 52
VAL 82 0.69 GLY 86 -1.40 ILE 50
VAL 82 0.52 ARG 87 -1.30 ILE 50
VAL 82 0.54 ASN 88 -1.07 ILE 50
VAL 82 0.50 LEU 89 -0.94 ILE 50
VAL 82 0.41 LEU 90 -1.00 GLY 49
MET 36 0.44 THR 91 -0.95 ILE 50
MET 36 0.40 GLN 92 -0.81 ILE 50
MET 36 0.34 ILE 93 -0.74 GLY 49
MET 36 0.34 GLY 94 -0.79 GLY 49
MET 36 0.34 CYS 95 -0.91 GLY 49
MET 36 0.35 THR 96 -0.98 GLY 49
MET 36 0.35 LEU 97 -0.98 GLY 49
MET 36 0.32 ASN 98 -1.16 CYS 67

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.