CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp_CA  ***

CA strain for 2602061615123036985

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 0.0001
GLN 2ILE 3 0.0000
ILE 3THR 4 0.0472
THR 4LEU 5 -0.0001
LEU 5TRP 6 -0.0003
TRP 6LYS 7 -0.2422
LYS 7ARG 8 -0.0003
ARG 8PRO 9 -0.0002
PRO 9LEU 10 -0.2887
LEU 10VAL 11 0.0002
VAL 11THR 12 -0.0000
THR 12ILE 13 -0.1512
ILE 13ARG 14 0.0001
ARG 14ILE 15 -0.0001
ILE 15GLY 16 -0.1397
GLY 16GLY 17 -0.0001
GLY 17GLN 18 0.0000
GLN 18LEU 19 -0.0705
LEU 19LEU 19 0.0022
LEU 19LYS 20 0.0001
LYS 20GLU 21 -0.0171
GLU 21GLU 21 -0.0022
GLU 21ALA 22 -0.0002
ALA 22LEU 23 0.0903
LEU 23LEU 24 -0.0003
LEU 24ASP 25 -0.0002
ASP 25THR 26 -0.1000
THR 26GLY 27 0.0002
GLY 27ALA 28 0.0000
ALA 28ASP 29 -0.0120
ASP 29ASP 30 -0.0000
ASP 30THR 31 0.0001
THR 31VAL 32 -0.3527
VAL 32LEU 33 0.0001
LEU 33GLU 34 -0.0001
GLU 34GLU 35 -0.0243
GLU 35MET 36 0.0000
MET 36ASN 37 -0.0000
ASN 37LEU 38 0.0597
LEU 38PRO 39 -0.0000
PRO 39GLY 40 -0.0001
GLY 40LYS 41 -0.2217
LYS 41TRP 42 0.0002
TRP 42LYS 43 -0.0001
LYS 43PRO 44 0.0071
PRO 44LYS 45 -0.0002
LYS 45MET 46 0.0000
MET 46ILE 47 0.0790
ILE 47ILE 47 -0.0034
ILE 47GLY 48 -0.0001
GLY 48GLY 49 0.0521
GLY 49ILE 50 -0.0001
ILE 50GLY 51 -0.0001
GLY 51GLY 52 0.0545
GLY 52PHE 53 0.0004
PHE 53ILE 54 -0.0001
ILE 54LYS 55 -0.2265
LYS 55VAL 56 -0.0001
VAL 56ARG 57 -0.0000
ARG 57GLN 58 -0.1257
GLN 58TYR 59 0.0001
TYR 59ASP 60 -0.0002
ASP 60GLN 61 -0.2382
GLN 61ILE 62 -0.0002
ILE 62PRO 63 0.0001
PRO 63VAL 64 -0.1944
VAL 64GLU 65 0.0000
GLU 65ILE 66 -0.0001
ILE 66CYS 67 -0.0610
CYS 67GLY 68 -0.0001
GLY 68HIS 69 -0.0000
HIS 69LYS 70 0.1249
LYS 70ALA 71 0.0001
ALA 71ILE 72 -0.0001
ILE 72GLY 73 -0.0251
GLY 73THR 74 0.0002
THR 74VAL 75 -0.0001
VAL 75LEU 76 0.1071
LEU 76VAL 77 0.0001
VAL 77GLY 78 0.0000
GLY 78PRO 79 0.0104
PRO 79THR 80 0.0000
THR 80PRO 81 -0.0001
PRO 81VAL 82 0.0125
VAL 82VAL 82 0.0047
VAL 82ASN 83 0.0001
ASN 83ILE 84 -0.0461
ILE 84ILE 85 0.0000
ILE 85GLY 86 0.0001
GLY 86ARG 87 -0.0837
ARG 87ASN 88 -0.0002
ASN 88LEU 89 0.0001
LEU 89LEU 90 0.0282
LEU 90THR 91 -0.0001
THR 91GLN 92 -0.0002
GLN 92ILE 93 -0.0024
ILE 93GLY 94 -0.0001
GLY 94CYS 95 0.0004
CYS 95CYS 95 0.0026
CYS 95THR 96 -0.0548
THR 96LEU 97 -0.0002
LEU 97ASN 98 0.0002
ASN 98PHE 99 -0.0001
PHE 99PRO 1 0.0358
PRO 1GLN 2 0.0004
GLN 2ILE 3 -0.0001
ILE 3THR 4 -0.0279
THR 4LEU 5 -0.0000
LEU 5TRP 6 0.0002
TRP 6LYS 7 0.1182
LYS 7ARG 8 0.0003
ARG 8PRO 9 0.0001
PRO 9LEU 10 -0.1534
LEU 10VAL 11 0.0001
VAL 11THR 12 0.0004
THR 12ILE 13 0.0791
ILE 13ARG 14 0.0002
ARG 14ILE 15 0.0002
ILE 15GLY 16 -0.0048
GLY 16GLY 17 -0.0000
GLY 17GLN 18 0.0001
GLN 18LEU 19 0.1348
LEU 19LYS 20 0.0000
LYS 20GLU 21 -0.0001
GLU 21ALA 22 0.0968
ALA 22LEU 23 0.0003
LEU 23LEU 24 -0.0002
LEU 24ASP 25 -0.1607
ASP 25THR 26 0.0001
THR 26GLY 27 -0.0002
GLY 27ALA 28 -0.0100
ALA 28ASP 29 0.0003
ASP 29ASP 30 0.0001
ASP 30THR 31 -0.1791
THR 31VAL 32 -0.0002
VAL 32VAL 32 0.0005
VAL 32LEU 33 0.0039
LEU 33GLU 34 0.0001
GLU 34GLU 35 -0.0000
GLU 35MET 36 0.0615
MET 36ASN 37 -0.0001
ASN 37LEU 38 -0.0000
LEU 38PRO 39 0.0233
PRO 39GLY 40 -0.0000
GLY 40LYS 41 0.0002
LYS 41TRP 42 0.0416
TRP 42LYS 43 -0.0000
LYS 43PRO 44 -0.0001
PRO 44LYS 45 -0.1979
LYS 45MET 46 0.0000
MET 46MET 46 -0.0143
MET 46ILE 47 0.0918
ILE 47GLY 48 0.0002
GLY 48GLY 49 -0.0000
GLY 49ILE 50 -0.1134
ILE 50GLY 51 0.0001
GLY 51GLY 52 0.0003
GLY 52PHE 53 -0.2350
PHE 53ILE 54 0.0001
ILE 54LYS 55 -0.0001
LYS 55VAL 56 -0.0123
VAL 56ARG 57 0.0002
ARG 57GLN 58 -0.0001
GLN 58TYR 59 -0.1257
TYR 59ASP 60 -0.0004
ASP 60GLN 61 0.0002
GLN 61ILE 62 0.0814
ILE 62PRO 63 0.0002
PRO 63VAL 64 0.0001
VAL 64GLU 65 0.0996
GLU 65GLU 65 -0.0023
GLU 65ILE 66 0.0002
ILE 66CYS 67 -0.0723
CYS 67GLY 68 0.0000
GLY 68HIS 69 -0.0001
HIS 69LYS 70 -0.0817
LYS 70ALA 71 0.0001
ALA 71ILE 72 0.0001
ILE 72GLY 73 0.1214
GLY 73THR 74 0.0002
THR 74VAL 75 -0.0001
VAL 75LEU 76 0.0027
LEU 76VAL 77 0.0000
VAL 77GLY 78 0.0001
GLY 78PRO 79 -0.0402
PRO 79THR 80 -0.0002
THR 80PRO 81 0.0002
PRO 81VAL 82 -0.0313
VAL 82VAL 82 0.0031
VAL 82ASN 83 -0.0001
ASN 83ILE 84 0.0479
ILE 84ILE 85 -0.0001
ILE 85GLY 86 -0.0000
GLY 86ARG 87 0.1128
ARG 87ASN 88 0.0001
ASN 88LEU 89 -0.0001
LEU 89LEU 90 -0.1731
LEU 90THR 91 -0.0000
THR 91GLN 92 -0.0000
GLN 92ILE 93 -0.2544
ILE 93GLY 94 -0.0003
GLY 94CYS 95 -0.0000
CYS 95THR 96 0.0384
THR 96LEU 97 0.0001
LEU 97ASN 98 -0.0003

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.