CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp-open  ***

CA strain for 2602061624473061020

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1001GLN 1002 -0.2362
GLN 1002ILE 1003 -0.0590
ILE 1003THR 1004 0.0812
THR 1004LEU 1005 0.0470
LEU 1005TRP 1006 -0.0192
TRP 1006LYS 1007 0.0104
LYS 1007LYS 1007 -0.0079
LYS 1007ARG 1008 0.0216
ARG 1008ARG 1008 -0.0185
ARG 1008PRO 1009 -0.0044
PRO 1009LEU 1010 -0.0322
LEU 1010VAL 1011 0.0225
VAL 1011THR 1012 -0.0308
THR 1012ILE 1013 0.0030
ILE 1013LYS 1014 0.0002
LYS 1014ILE 1015 -0.0221
ILE 1015GLY 1016 -0.0155
GLY 1016GLY 1017 -0.0123
GLY 1017GLN 1018 -0.0028
GLN 1018LEU 1019 -0.0199
LEU 1019LYS 1020 0.0079
LYS 1020GLU 1021 -0.0265
GLU 1021GLU 1021 -0.0061
GLU 1021ALA 1022 0.0051
ALA 1022LEU 1023 0.0053
LEU 1023LEU 1024 -0.0225
LEU 1024ASP 1025 0.0143
ASP 1025THR 1026 -0.0028
THR 1026GLY 1027 0.0114
GLY 1027ALA 1028 0.0169
ALA 1028ASP 1029 0.0009
ASP 1029ASP 1030 0.0145
ASP 1030THR 1031 -0.0017
THR 1031VAL 1032 0.0009
VAL 1032VAL 1032 -0.0062
VAL 1032LEU 1033 0.0117
LEU 1033GLU 1034 0.0029
GLU 1034GLU 1035 -0.0068
GLU 1035MET 1036 0.0070
MET 1036MET 1036 0.0216
MET 1036ASN 1037 0.0014
ASN 1037LEU 1038 0.0125
LEU 1038PRO 1039 0.0004
PRO 1039GLY 1040 -0.0193
GLY 1040ARG 1041 -0.0149
ARG 1041TRP 1042 -0.0099
TRP 1042LYS 1043 -0.0092
LYS 1043PRO 1044 -0.0178
PRO 1044LYS 1045 0.0179
LYS 1045MET 1046 -0.0553
MET 1046ILE 1047 0.0398
ILE 1047GLY 1048 0.0116
GLY 1048GLY 1049 0.0172
GLY 1049ILE 1050 -0.0393
ILE 1050GLY 1051 0.0069
GLY 1051GLY 1052 0.0037
GLY 1052PHE 1053 -0.0292
PHE 1053ILE 1054 0.0186
ILE 1054LYS 1055 0.0072
LYS 1055VAL 1056 -0.0014
VAL 1056ARG 1057 0.0000
ARG 1057GLN 1058 -0.0089
GLN 1058TYR 1059 -0.0181
TYR 1059ASP 1060 -0.0042
ASP 1060GLN 1061 -0.0124
GLN 1061ILE 1062 -0.0029
ILE 1062LEU 1063 -0.0270
LEU 1063ILE 1064 -0.0088
ILE 1064ILE 1064 -0.0025
ILE 1064GLU 1065 -0.0132
GLU 1065ILE 1066 0.0028
ILE 1066CYS 1067 -0.0444
CYS 1067GLY 1068 0.0009
GLY 1068HIS 1069 0.0090
HIS 1069LYS 1070 -0.0204
LYS 1070ALA 1071 -0.0003
ALA 1071ILE 1072 -0.0043
ILE 1072GLY 1073 -0.0094
GLY 1073THR 1074 -0.0070
THR 1074VAL 1075 0.0026
VAL 1075LEU 1076 -0.0069
LEU 1076VAL 1077 0.0099
VAL 1077GLY 1078 0.0007
GLY 1078PRO 1079 0.0073
PRO 1079THR 1080 -0.0113
THR 1080PRO 1081 -0.0016
PRO 1081VAL 1082 0.0025
VAL 1082ASN 1083 0.0021
ASN 1083ILE 1084 -0.0030
ILE 1084ILE 1084 -0.0490
ILE 1084ILE 1085 -0.0081
ILE 1085GLY 1086 -0.0012
GLY 1086ARG 1087 -0.0012
ARG 1087ASN 1088 0.0106
ASN 1088LEU 1089 -0.0101
LEU 1089LEU 1090 0.0216
LEU 1090THR 1091 -0.0234
THR 1091THR 1091 0.0033
THR 1091THR 1091 -0.0018
THR 1091GLN 1092 0.0213
GLN 1092ILE 1093 -0.0066
ILE 1093GLY 1094 0.0568
GLY 1094CYS 1095 -0.0485
CYS 1095THR 1096 -0.0516
THR 1096LEU 1097 0.1333
LEU 1097ASN 1098 -0.0346
ASN 1098PHE 1099 0.0044

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.