CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp-open  ***

<R2> analysis for 2602061624473061020

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1810
PRO 10010.0296
GLN 10020.0250
ILE 10030.0216
THR 10040.0167
LEU 10050.0158
TRP 10060.0248
LYS 10070.0098
LYS 10070.0093
ARG 10080.0131
ARG 10080.0128
PRO 10090.0105
LEU 10100.0110
VAL 10110.0250
THR 10120.0246
ILE 10130.0233
LYS 10140.0326
ILE 10150.0229
GLY 10160.0217
GLY 10170.0520
GLN 10180.0358
LEU 10190.0310
LYS 10200.0204
GLU 10210.0178
GLU 10210.0177
ALA 10220.0092
LEU 10230.0082
LEU 10240.0073
ASP 10250.0124
THR 10260.0207
GLY 10270.0654
ALA 10280.0063
ASP 10290.0097
ASP 10300.0061
THR 10310.0111
VAL 10320.0122
VAL 10320.0122
LEU 10330.0160
GLU 10340.0227
GLU 10350.0237
MET 10360.0143
MET 10360.0142
ASN 10370.0343
LEU 10380.0343
PRO 10390.0333
GLY 10400.1810
ARG 10410.0279
TRP 10420.0197
LYS 10430.0218
PRO 10440.0286
LYS 10450.0150
MET 10460.0260
ILE 10470.0173
GLY 10480.1111
GLY 10490.1758
ILE 10500.0397
GLY 10510.0437
GLY 10520.0242
PHE 10530.0380
ILE 10540.0145
LYS 10550.0116
VAL 10560.0143
ARG 10570.0232
GLN 10580.0160
TYR 10590.0019
ASP 10600.0207
GLN 10610.0393
ILE 10620.0294
LEU 10630.0171
ILE 10640.0128
ILE 10640.0129
GLU 10650.0246
ILE 10660.0148
CYS 10670.0363
GLY 10680.0384
HIS 10690.0249
LYS 10700.0093
ALA 10710.0094
ILE 10720.0276
GLY 10730.0270
THR 10740.0225
VAL 10750.0193
LEU 10760.0093
VAL 10770.0097
GLY 10780.0129
PRO 10790.0268
THR 10800.0308
PRO 10810.0415
VAL 10820.0191
ASN 10830.0160
ILE 10840.0102
ILE 10840.0102
ILE 10850.0043
GLY 10860.0126
ARG 10870.0276
ASN 10880.0284
LEU 10890.0221
LEU 10900.0335
THR 10910.0390
THR 10910.0390
THR 10910.0400
GLN 10920.0330
ILE 10930.0204
GLY 10940.0542
CYS 10950.0178
THR 10960.0188
LEU 10970.0315
ASN 10980.0298
PHE 10990.0490

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.