CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIVp-open  ***

CA distance fluctuations for 2602061624473061020

---  normal mode 9  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ILE 1050 1.01 PRO 1001 -0.25 ASN 1098
ILE 1050 1.12 GLN 1002 -0.16 PRO 1001
ILE 1050 1.25 ILE 1003 -0.18 GLY 1068
ILE 1050 1.38 THR 1004 -0.19 THR 1012
ILE 1050 1.59 LEU 1005 -0.12 THR 1012
ILE 1050 1.57 TRP 1006 -0.16 THR 1012
ILE 1050 1.60 LYS 1007 -0.17 THR 1012
ILE 1050 1.59 LYS 1007 -0.18 THR 1012
ILE 1050 1.61 ARG 1008 -0.08 THR 1012
ILE 1050 1.61 ARG 1008 -0.08 THR 1012
ILE 1050 1.43 PRO 1009 -0.13 LEU 1097
ILE 1050 1.23 LEU 1010 -0.11 LEU 1097
ILE 1050 1.06 VAL 1011 -0.16 THR 1004
ILE 1050 0.89 THR 1012 -0.19 THR 1004
ILE 1050 0.79 ILE 1013 -0.12 THR 1004
ILE 1050 0.66 LYS 1014 -0.12 THR 1004
ILE 1050 0.56 ILE 1015 -0.12 LEU 1038
ILE 1050 0.44 GLY 1016 -0.12 LEU 1038
ILE 1050 0.47 GLY 1017 -0.13 PRO 1039
ILE 1050 0.55 GLN 1018 -0.11 LYS 1007
ILE 1050 0.66 LEU 1019 -0.14 LYS 1007
ILE 1050 0.75 LYS 1020 -0.13 LYS 1007
ILE 1050 0.91 GLU 1021 -0.13 LYS 1007
ILE 1050 0.91 GLU 1021 -0.13 LYS 1007
ILE 1050 1.00 ALA 1022 -0.06 LEU 1010
ILE 1050 1.21 LEU 1023 -0.05 LEU 1010
ILE 1050 1.20 LEU 1024 -0.06 THR 1026
ILE 1050 1.24 ASP 1025 -0.04 LEU 1024
GLY 1049 1.14 THR 1026 -0.07 CYS 1095
GLY 1049 1.37 GLY 1027 -0.05 THR 1091
GLY 1048 1.35 ALA 1028 -0.04 ARG 1087
GLY 1048 0.86 ASP 1029 -0.08 PRO 1081
GLY 1048 0.82 ASP 1030 -0.08 THR 1080
GLY 1048 0.84 THR 1031 -0.04 THR 1080
GLY 1048 0.76 VAL 1032 -0.06 ASP 1030
GLY 1048 0.77 VAL 1032 -0.06 ASP 1030
GLY 1048 0.61 LEU 1033 -0.02 CYS 1095
ILE 1050 0.52 GLU 1034 -0.03 VAL 1056
ILE 1050 0.36 GLU 1035 -0.12 LYS 1055
ILE 1050 0.37 MET 1036 -0.11 LYS 1055
ILE 1050 0.37 MET 1036 -0.11 LYS 1055
ILE 1050 0.29 ASN 1037 -0.12 LYS 1055
ILE 1050 0.29 LEU 1038 -0.12 GLY 1016
GLY 1048 0.23 PRO 1039 -0.13 GLY 1017
GLY 1048 0.19 GLY 1040 -0.17 LEU 1063
GLY 1048 0.13 ARG 1041 -0.14 MET 1046
GLY 1048 0.14 TRP 1042 -0.17 MET 1046
PHE 1099 0.17 LYS 1043 -0.24 MET 1046
PHE 1099 0.24 PRO 1044 -0.28 MET 1046
ALA 1028 0.28 LYS 1045 -0.32 MET 1046
ALA 1028 0.50 MET 1046 -0.32 LYS 1045
ALA 1028 0.68 ILE 1047 -0.03 ILE 1054
ALA 1028 1.35 GLY 1048 -0.05 PHE 1053
GLY 1027 1.37 GLY 1049 -0.20 PRO 1044
ARG 1008 1.61 ILE 1050 -0.06 GLY 1049
TRP 1006 1.42 GLY 1051 -0.08 PRO 1044
GLY 1027 0.99 GLY 1052 -0.25 PRO 1044
GLY 1027 0.83 PHE 1053 -0.22 PRO 1044
PHE 1099 0.46 ILE 1054 -0.06 LYS 1043
PHE 1099 0.36 LYS 1055 -0.17 GLY 1052
PHE 1099 0.27 VAL 1056 -0.13 MET 1046
PHE 1099 0.21 ARG 1057 -0.20 MET 1046
GLY 1048 0.25 GLN 1058 -0.14 MET 1046
GLY 1048 0.27 TYR 1059 -0.11 MET 1046
GLY 1048 0.27 ASP 1060 -0.10 LYS 1045
GLY 1048 0.30 GLN 1061 -0.10 ARG 1041
ILE 1050 0.37 ILE 1062 -0.13 GLY 1040
ILE 1050 0.46 LEU 1063 -0.17 GLY 1040
ILE 1050 0.59 ILE 1064 -0.12 GLY 1040
ILE 1050 0.59 ILE 1064 -0.12 GLY 1040
ILE 1050 0.68 GLU 1065 -0.13 ASN 1098
ILE 1050 0.81 ILE 1066 -0.14 LEU 1097
ILE 1050 0.88 CYS 1067 -0.19 LEU 1097
ILE 1050 0.76 GLY 1068 -0.22 ASN 1098
ILE 1050 0.72 HIS 1069 -0.22 ASN 1098
ILE 1050 0.62 LYS 1070 -0.17 ASN 1098
ILE 1050 0.57 ALA 1071 -0.12 ASN 1098
ILE 1050 0.46 ILE 1072 -0.10 GLY 1040
GLY 1048 0.42 GLY 1073 -0.07 GLY 1094
GLY 1048 0.41 THR 1074 -0.05 LYS 1045
GLY 1048 0.49 VAL 1075 -0.04 VAL 1056
GLY 1048 0.45 LEU 1076 -0.06 VAL 1056
GLY 1048 0.39 VAL 1077 -0.09 VAL 1056
GLY 1048 0.29 GLY 1078 -0.08 LYS 1055
ILE 1050 0.33 PRO 1079 -0.06 ASP 1030
ILE 1050 0.55 THR 1080 -0.08 ASP 1030
GLY 1051 0.73 PRO 1081 -0.08 ASP 1030
ILE 1050 0.92 VAL 1082 -0.06 ASP 1029
ILE 1050 0.86 ASN 1083 -0.05 ASP 1029
GLY 1048 1.01 ILE 1084 -0.07 ILE 1084
GLY 1048 1.01 ILE 1084 -0.07 ILE 1084
ILE 1050 0.90 ILE 1085 -0.03 LEU 1010
GLY 1048 0.99 GLY 1086 -0.03 ASP 1029
GLY 1048 0.80 ARG 1087 -0.04 GLY 1027
GLY 1048 0.62 ASN 1088 -0.04 PRO 1081
ILE 1050 0.67 LEU 1089 -0.03 CYS 1095
ILE 1050 0.83 LEU 1090 -0.07 THR 1026
ILE 1050 0.68 THR 1091 -0.07 THR 1026
ILE 1050 0.68 THR 1091 -0.07 THR 1026
ILE 1050 0.68 THR 1091 -0.07 THR 1026
ILE 1050 0.60 GLN 1092 -0.08 GLY 1094
ILE 1050 0.72 ILE 1093 -0.15 ASN 1098
ILE 1050 0.75 GLY 1094 -0.17 ASN 1098
ILE 1050 0.90 CYS 1095 -0.13 THR 1096
ILE 1050 0.93 THR 1096 -0.14 HIS 1069
ILE 1050 1.08 LEU 1097 -0.21 PRO 1001
ILE 1050 1.15 ASN 1098 -0.25 PRO 1001
ILE 1050 1.34 PHE 1099 -0.14 GLY 1094

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.