CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

CA strain for 2602061631263072433

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1001GLN 1002 0.0234
GLN 1002ILE 1003 -0.0350
ILE 1003THR 1004 0.1283
THR 1004LEU 1005 0.0348
LEU 1005TRP 1006 0.0217
TRP 1006LYS 1007 -0.0421
LYS 1007LYS 1007 0.0006
LYS 1007ARG 1008 -0.0079
ARG 1008ARG 1008 0.0000
ARG 1008PRO 1009 0.0101
PRO 1009LEU 1010 -0.1107
LEU 1010VAL 1011 0.0762
VAL 1011THR 1012 -0.0422
THR 1012ILE 1013 0.0161
ILE 1013LYS 1014 0.0106
LYS 1014ILE 1015 -0.0423
ILE 1015GLY 1016 -0.0565
GLY 1016GLY 1017 -0.0680
GLY 1017GLN 1018 0.0081
GLN 1018LEU 1019 -0.0704
LEU 1019LYS 1020 0.0512
LYS 1020GLU 1021 -0.1192
GLU 1021GLU 1021 0.0050
GLU 1021ALA 1022 0.0043
ALA 1022LEU 1023 -0.0167
LEU 1023LEU 1024 -0.0508
LEU 1024ASP 1025 -0.0028
ASP 1025THR 1026 -0.0870
THR 1026GLY 1027 -0.0151
GLY 1027ALA 1028 0.0591
ALA 1028ASP 1029 0.0034
ASP 1029ASP 1030 0.1918
ASP 1030THR 1031 -0.0023
THR 1031VAL 1032 0.0081
VAL 1032VAL 1032 -0.0044
VAL 1032LEU 1033 0.0613
LEU 1033GLU 1034 0.0386
GLU 1034GLU 1035 -0.1122
GLU 1035MET 1036 0.0830
MET 1036MET 1036 0.0223
MET 1036ASN 1037 -0.0146
ASN 1037LEU 1038 0.0509
LEU 1038PRO 1039 -0.0083
PRO 1039GLY 1040 -0.0979
GLY 1040ARG 1041 -0.1068
ARG 1041TRP 1042 -0.0752
TRP 1042LYS 1043 -0.0552
LYS 1043PRO 1044 -0.0739
PRO 1044LYS 1045 0.0936
LYS 1045MET 1046 -0.3338
MET 1046ILE 1047 0.1940
ILE 1047GLY 1048 0.0130
GLY 1048GLY 1049 -0.0335
GLY 1049ILE 1050 0.0407
ILE 1050GLY 1051 -0.0629
GLY 1051GLY 1052 0.0172
GLY 1052PHE 1053 -0.1071
PHE 1053ILE 1054 0.2008
ILE 1054LYS 1055 0.1228
LYS 1055VAL 1056 0.0152
VAL 1056ARG 1057 0.0377
ARG 1057GLN 1058 -0.0109
GLN 1058TYR 1059 -0.1119
TYR 1059ASP 1060 -0.0338
ASP 1060GLN 1061 -0.0415
GLN 1061ILE 1062 -0.0277
ILE 1062LEU 1063 -0.0637
LEU 1063ILE 1064 -0.0236
ILE 1064ILE 1064 -0.0087
ILE 1064GLU 1065 -0.0177
GLU 1065ILE 1066 -0.0093
ILE 1066CYS 1067 -0.0012
CYS 1067GLY 1068 0.0427
GLY 1068HIS 1069 -0.0508
HIS 1069LYS 1070 0.0605
LYS 1070ALA 1071 -0.0062
ALA 1071ILE 1072 0.0500
ILE 1072GLY 1073 -0.0336
GLY 1073THR 1074 -0.0684
THR 1074VAL 1075 0.0090
VAL 1075LEU 1076 -0.0617
LEU 1076VAL 1077 0.0505
VAL 1077GLY 1078 0.0362
GLY 1078PRO 1079 0.0297
PRO 1079THR 1080 -0.1747
THR 1080PRO 1081 0.0666
PRO 1081VAL 1082 -0.1144
VAL 1082ASN 1083 -0.0144
ASN 1083ILE 1084 -0.0106
ILE 1084ILE 1084 0.0496
ILE 1084ILE 1085 -0.0203
ILE 1085GLY 1086 0.0077
GLY 1086ARG 1087 -0.0056
ARG 1087ASN 1088 0.0947
ASN 1088LEU 1089 -0.0305
LEU 1089LEU 1090 0.1014
LEU 1090THR 1091 -0.0256
THR 1091THR 1091 -0.0184
THR 1091THR 1091 0.0019
THR 1091GLN 1092 0.0065
GLN 1092ILE 1093 0.0542
ILE 1093GLY 1094 -0.0119
GLY 1094CYS 1095 -0.0020
CYS 1095THR 1096 0.0405
THR 1096LEU 1097 0.0358
LEU 1097ASN 1098 -0.0009
ASN 1098PHE 1099 0.0317
PHE 1099PRO 1001 0.0142
PRO 1001GLN 1002 0.0234
GLN 1002ILE 1003 -0.0350
ILE 1003THR 1004 0.1283
THR 1004LEU 1005 0.0348
LEU 1005TRP 1006 0.0217
TRP 1006LYS 1007 -0.0421
LYS 1007LYS 1007 0.0006
LYS 1007ARG 1008 -0.0079
ARG 1008ARG 1008 0.0000
ARG 1008PRO 1009 0.0101
PRO 1009LEU 1010 -0.1107
LEU 1010VAL 1011 0.0762
VAL 1011THR 1012 -0.0422
THR 1012ILE 1013 0.0161
ILE 1013LYS 1014 0.0106
LYS 1014ILE 1015 -0.0423
ILE 1015GLY 1016 -0.0565
GLY 1016GLY 1017 -0.0680
GLY 1017GLN 1018 0.0081
GLN 1018LEU 1019 -0.0704
LEU 1019LYS 1020 0.0512
LYS 1020GLU 1021 -0.1192
GLU 1021GLU 1021 0.0050
GLU 1021ALA 1022 0.0043
ALA 1022LEU 1023 -0.0167
LEU 1023LEU 1024 -0.0508
LEU 1024ASP 1025 -0.0028
ASP 1025THR 1026 -0.0870
THR 1026GLY 1027 -0.0151
GLY 1027ALA 1028 0.0591
ALA 1028ASP 1029 0.0034
ASP 1029ASP 1030 0.1918
ASP 1030THR 1031 -0.0023
THR 1031VAL 1032 0.0081
VAL 1032VAL 1032 -0.0044
VAL 1032LEU 1033 0.0613
LEU 1033GLU 1034 0.0386
GLU 1034GLU 1035 -0.1122
GLU 1035MET 1036 0.0830
MET 1036MET 1036 0.0223
MET 1036ASN 1037 -0.0146
ASN 1037LEU 1038 0.0509
LEU 1038PRO 1039 -0.0083
PRO 1039GLY 1040 -0.0979
GLY 1040ARG 1041 -0.1068
ARG 1041TRP 1042 -0.0752
TRP 1042LYS 1043 -0.0552
LYS 1043PRO 1044 -0.0739
PRO 1044LYS 1045 0.0936
LYS 1045MET 1046 -0.3338
MET 1046ILE 1047 0.1940
ILE 1047GLY 1048 0.0130
GLY 1048GLY 1049 -0.0335
GLY 1049ILE 1050 0.0407
ILE 1050GLY 1051 -0.0629
GLY 1051GLY 1052 0.0172
GLY 1052PHE 1053 -0.1071
PHE 1053ILE 1054 0.2008
ILE 1054LYS 1055 0.1228
LYS 1055VAL 1056 0.0152
VAL 1056ARG 1057 0.0377
ARG 1057GLN 1058 -0.0109
GLN 1058TYR 1059 -0.1119
TYR 1059ASP 1060 -0.0338
ASP 1060GLN 1061 -0.0415
GLN 1061ILE 1062 -0.0277
ILE 1062LEU 1063 -0.0637
LEU 1063ILE 1064 -0.0236
ILE 1064ILE 1064 -0.0087
ILE 1064GLU 1065 -0.0177
GLU 1065ILE 1066 -0.0093
ILE 1066CYS 1067 -0.0012
CYS 1067GLY 1068 0.0427
GLY 1068HIS 1069 -0.0508
HIS 1069LYS 1070 0.0605
LYS 1070ALA 1071 -0.0062
ALA 1071ILE 1072 0.0500
ILE 1072GLY 1073 -0.0336
GLY 1073THR 1074 -0.0684
THR 1074VAL 1075 0.0090
VAL 1075LEU 1076 -0.0617
LEU 1076VAL 1077 0.0505
VAL 1077GLY 1078 0.0362
GLY 1078PRO 1079 0.0297
PRO 1079THR 1080 -0.1747
THR 1080PRO 1081 0.0666
PRO 1081VAL 1082 -0.1144
VAL 1082ASN 1083 -0.0144
ASN 1083ILE 1084 -0.0106
ILE 1084ILE 1084 0.0496
ILE 1084ILE 1085 -0.0203
ILE 1085GLY 1086 0.0077
GLY 1086ARG 1087 -0.0056
ARG 1087ASN 1088 0.0947
ASN 1088LEU 1089 -0.0305
LEU 1089LEU 1090 0.1014
LEU 1090THR 1091 -0.0256
THR 1091THR 1091 -0.0184
THR 1091THR 1091 0.0019
THR 1091GLN 1092 0.0065
GLN 1092ILE 1093 0.0542
ILE 1093GLY 1094 -0.0119
GLY 1094CYS 1095 -0.0020
CYS 1095THR 1096 0.0405
THR 1096LEU 1097 0.0358
LEU 1097ASN 1098 -0.0009
ASN 1098PHE 1099 0.0317

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.