CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

CA distance fluctuations for 2602061631263072433

---  normal mode 10  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
GLY 1051 0.31 PRO 1001 -0.14 THR 1012
GLY 1051 0.30 GLN 1002 -0.17 VAL 1011
ILE 1050 0.38 ILE 1003 -0.17 VAL 1011
ILE 1050 0.41 THR 1004 -0.11 GLU 1021
ILE 1050 0.48 LEU 1005 -0.11 PRO 1081
ILE 1050 0.54 TRP 1006 -0.15 ILE 1050
ILE 1050 0.62 LYS 1007 -0.19 ILE 1050
ILE 1050 0.62 LYS 1007 -0.19 ILE 1050
ILE 1050 0.68 ARG 1008 -0.16 PRO 1081
ILE 1050 0.68 ARG 1008 -0.16 PRO 1081
ILE 1050 0.56 PRO 1009 -0.11 PRO 1081
GLY 1051 0.63 LEU 1010 -0.12 ILE 1003
GLY 1051 0.56 VAL 1011 -0.17 GLN 1002
GLY 1051 0.55 THR 1012 -0.16 GLN 1002
GLY 1051 0.48 ILE 1013 -0.10 GLN 1002
GLY 1051 0.43 LYS 1014 -0.12 PRO 1039
GLY 1051 0.38 ILE 1015 -0.14 PRO 1039
GLY 1051 0.35 GLY 1016 -0.19 PRO 1039
GLY 1051 0.39 GLY 1017 -0.21 PRO 1039
GLY 1051 0.49 GLN 1018 -0.16 PRO 1039
GLY 1051 0.55 LEU 1019 -0.13 PRO 1039
GLY 1051 0.63 LYS 1020 -0.13 GLN 1002
GLY 1051 0.69 GLU 1021 -0.13 GLN 1002
GLY 1051 0.68 GLU 1021 -0.13 GLN 1002
GLY 1051 0.64 ALA 1022 -0.11 MET 1036
ILE 1050 0.61 LEU 1023 -0.10 GLU 1035
ILE 1050 0.45 LEU 1024 -0.07 VAL 1011
ILE 1050 0.45 ASP 1025 -0.09 THR 1026
ILE 1050 0.48 THR 1026 -0.09 PRO 1079
ILE 1050 0.65 GLY 1027 -0.12 PRO 1079
ILE 1050 0.72 ALA 1028 -0.13 PRO 1079
ILE 1050 0.76 ASP 1029 -0.14 PRO 1079
ILE 1050 0.67 ASP 1030 -0.11 PRO 1079
ILE 1050 0.50 THR 1031 -0.10 PRO 1079
GLY 1049 0.53 VAL 1032 -0.10 PRO 1079
GLY 1049 0.53 VAL 1032 -0.10 PRO 1079
GLY 1051 0.53 LEU 1033 -0.09 PRO 1079
GLY 1051 0.63 GLU 1034 -0.15 VAL 1082
GLY 1051 0.53 GLU 1035 -0.15 PRO 1081
GLY 1051 0.46 MET 1036 -0.13 ARG 1041
GLY 1051 0.46 MET 1036 -0.13 ARG 1041
GLY 1051 0.35 ASN 1037 -0.18 ARG 1041
GLY 1049 0.28 LEU 1038 -0.15 GLY 1016
GLY 1049 0.27 PRO 1039 -0.21 GLY 1017
GLY 1049 0.30 GLY 1040 -0.17 GLY 1017
ILE 1050 0.34 ARG 1041 -0.18 ASN 1037
ILE 1050 0.42 TRP 1042 -0.16 MET 1046
ILE 1050 0.53 LYS 1043 -0.19 MET 1046
ILE 1050 0.62 PRO 1044 -0.18 MET 1046
ILE 1050 0.83 LYS 1045 -0.33 MET 1046
ILE 1050 1.13 MET 1046 -0.33 LYS 1045
ILE 1050 1.25 ILE 1047 -0.18 THR 1074
GLY 1049 1.38 GLY 1048 -0.14 GLY 1052
GLY 1049 1.89 GLY 1049 -0.22 LYS 1045
GLY 1049 1.47 ILE 1050 -0.19 LYS 1007
GLY 1049 1.17 GLY 1051 -0.15 LYS 1007
GLY 1049 1.43 GLY 1052 -0.16 LYS 1045
ILE 1050 1.25 PHE 1053 -0.14 LYS 1045
ILE 1050 0.82 ILE 1054 -0.18 PRO 1079
ILE 1050 0.70 LYS 1055 -0.09 PRO 1079
ILE 1050 0.57 VAL 1056 -0.09 PRO 1079
ILE 1050 0.48 ARG 1057 -0.14 MET 1046
ILE 1050 0.55 GLN 1058 -0.18 MET 1046
ILE 1050 0.42 TYR 1059 -0.16 MET 1046
ILE 1050 0.43 ASP 1060 -0.19 GLY 1049
ILE 1050 0.35 GLN 1061 -0.18 GLY 1049
GLY 1049 0.32 ILE 1062 -0.12 MET 1046
GLY 1049 0.28 LEU 1063 -0.09 MET 1046
GLY 1051 0.28 ILE 1064 -0.06 PRO 1079
GLY 1051 0.28 ILE 1064 -0.06 PRO 1079
GLY 1051 0.32 GLU 1065 -0.06 PRO 1039
GLY 1051 0.36 ILE 1066 -0.07 CYS 1095
GLY 1051 0.41 CYS 1067 -0.09 LEU 1019
GLY 1051 0.34 GLY 1068 -0.08 GLY 1094
GLY 1051 0.26 HIS 1069 -0.07 THR 1004
GLY 1049 0.24 LYS 1070 -0.07 GLN 1092
GLY 1049 0.28 ALA 1071 -0.07 PRO 1079
ILE 1050 0.30 ILE 1072 -0.13 ILE 1047
ILE 1050 0.38 GLY 1073 -0.17 GLY 1049
ILE 1050 0.46 THR 1074 -0.18 ILE 1047
GLY 1049 0.43 VAL 1075 -0.10 ILE 1047
ILE 1050 0.51 LEU 1076 -0.08 PRO 1079
GLY 1049 0.43 VAL 1077 -0.09 PRO 1079
GLY 1051 0.45 GLY 1078 -0.11 PRO 1079
GLY 1051 0.62 PRO 1079 -0.18 ILE 1054
GLY 1051 0.76 THR 1080 -0.17 PRO 1079
GLY 1051 1.11 PRO 1081 -0.16 ARG 1008
GLY 1051 0.93 VAL 1082 -0.15 GLU 1034
GLY 1051 0.71 ASN 1083 -0.11 ARG 1008
GLY 1051 0.55 ILE 1084 -0.08 PRO 1079
GLY 1051 0.55 ILE 1084 -0.08 PRO 1079
GLY 1049 0.41 ILE 1085 -0.08 PRO 1079
ILE 1050 0.51 GLY 1086 -0.11 PRO 1079
ILE 1050 0.53 ARG 1087 -0.11 PRO 1079
ILE 1050 0.51 ASN 1088 -0.10 PRO 1079
ILE 1050 0.40 LEU 1089 -0.09 PRO 1079
ILE 1050 0.37 LEU 1090 -0.08 PRO 1079
ILE 1050 0.40 THR 1091 -0.09 PRO 1081
ILE 1050 0.40 THR 1091 -0.09 PRO 1081
ILE 1050 0.40 THR 1091 -0.09 PRO 1081
ILE 1050 0.35 GLN 1092 -0.09 PRO 1079
ILE 1050 0.28 ILE 1093 -0.07 HIS 1069
ILE 1050 0.29 GLY 1094 -0.10 THR 1004
ILE 1050 0.28 CYS 1095 -0.10 VAL 1011
ILE 1050 0.30 THR 1096 -0.13 VAL 1011
ILE 1050 0.29 LEU 1097 -0.15 VAL 1011
GLY 1051 0.23 ASN 1098 -0.15 VAL 1011
GLY 1051 0.21 PHE 1099 -0.11 VAL 1011
GLY 1051 0.31 PRO 1001 -0.14 THR 1012
GLY 1051 0.30 GLN 1002 -0.17 VAL 1011
ILE 1050 0.38 ILE 1003 -0.17 VAL 1011
ILE 1050 0.41 THR 1004 -0.11 GLU 1021
ILE 1050 0.48 LEU 1005 -0.11 PRO 1081
ILE 1050 0.54 TRP 1006 -0.15 ILE 1050
ILE 1050 0.62 LYS 1007 -0.19 ILE 1050
ILE 1050 0.62 LYS 1007 -0.19 ILE 1050
ILE 1050 0.68 ARG 1008 -0.16 PRO 1081
ILE 1050 0.68 ARG 1008 -0.16 PRO 1081
ILE 1050 0.56 PRO 1009 -0.11 PRO 1081
GLY 1051 0.63 LEU 1010 -0.12 ILE 1003
GLY 1051 0.56 VAL 1011 -0.17 GLN 1002
GLY 1051 0.55 THR 1012 -0.16 GLN 1002
GLY 1051 0.48 ILE 1013 -0.10 GLN 1002
GLY 1051 0.43 LYS 1014 -0.12 PRO 1039
GLY 1051 0.38 ILE 1015 -0.14 PRO 1039
GLY 1051 0.35 GLY 1016 -0.19 PRO 1039
GLY 1051 0.39 GLY 1017 -0.21 PRO 1039
GLY 1051 0.49 GLN 1018 -0.16 PRO 1039
GLY 1051 0.55 LEU 1019 -0.13 PRO 1039
GLY 1051 0.63 LYS 1020 -0.13 GLN 1002
GLY 1051 0.69 GLU 1021 -0.13 GLN 1002
GLY 1051 0.68 GLU 1021 -0.13 GLN 1002
GLY 1051 0.64 ALA 1022 -0.11 MET 1036
ILE 1050 0.61 LEU 1023 -0.10 GLU 1035
ILE 1050 0.45 LEU 1024 -0.07 VAL 1011
ILE 1050 0.45 ASP 1025 -0.09 THR 1026
ILE 1050 0.48 THR 1026 -0.09 PRO 1079
ILE 1050 0.65 GLY 1027 -0.12 PRO 1079
ILE 1050 0.72 ALA 1028 -0.13 PRO 1079
ILE 1050 0.76 ASP 1029 -0.14 PRO 1079
ILE 1050 0.67 ASP 1030 -0.11 PRO 1079
ILE 1050 0.50 THR 1031 -0.10 PRO 1079
GLY 1049 0.53 VAL 1032 -0.10 PRO 1079
GLY 1049 0.53 VAL 1032 -0.10 PRO 1079
GLY 1051 0.53 LEU 1033 -0.09 PRO 1079
GLY 1051 0.63 GLU 1034 -0.15 VAL 1082
GLY 1051 0.53 GLU 1035 -0.15 PRO 1081
GLY 1051 0.46 MET 1036 -0.13 ARG 1041
GLY 1051 0.46 MET 1036 -0.13 ARG 1041
GLY 1051 0.35 ASN 1037 -0.18 ARG 1041
GLY 1049 0.28 LEU 1038 -0.15 GLY 1016
GLY 1049 0.27 PRO 1039 -0.21 GLY 1017
GLY 1049 0.30 GLY 1040 -0.17 GLY 1017
ILE 1050 0.34 ARG 1041 -0.18 ASN 1037
ILE 1050 0.42 TRP 1042 -0.16 MET 1046
ILE 1050 0.53 LYS 1043 -0.19 MET 1046
ILE 1050 0.62 PRO 1044 -0.18 MET 1046
ILE 1050 0.83 LYS 1045 -0.33 MET 1046
ILE 1050 1.13 MET 1046 -0.33 LYS 1045
ILE 1050 1.25 ILE 1047 -0.18 THR 1074
GLY 1049 1.38 GLY 1048 -0.14 GLY 1052
GLY 1049 1.89 GLY 1049 -0.22 LYS 1045
GLY 1049 1.47 ILE 1050 -0.19 LYS 1007
GLY 1049 1.17 GLY 1051 -0.15 LYS 1007
GLY 1049 1.43 GLY 1052 -0.16 LYS 1045
ILE 1050 1.25 PHE 1053 -0.14 LYS 1045
ILE 1050 0.82 ILE 1054 -0.18 PRO 1079
ILE 1050 0.70 LYS 1055 -0.09 PRO 1079
ILE 1050 0.57 VAL 1056 -0.09 PRO 1079
ILE 1050 0.48 ARG 1057 -0.14 MET 1046
ILE 1050 0.55 GLN 1058 -0.18 MET 1046
ILE 1050 0.42 TYR 1059 -0.16 MET 1046
ILE 1050 0.43 ASP 1060 -0.19 GLY 1049
ILE 1050 0.35 GLN 1061 -0.18 GLY 1049
GLY 1049 0.32 ILE 1062 -0.12 MET 1046
GLY 1049 0.28 LEU 1063 -0.09 MET 1046
GLY 1051 0.28 ILE 1064 -0.06 PRO 1079
GLY 1051 0.28 ILE 1064 -0.06 PRO 1079
GLY 1051 0.32 GLU 1065 -0.06 PRO 1039
GLY 1051 0.36 ILE 1066 -0.07 CYS 1095
GLY 1051 0.41 CYS 1067 -0.09 LEU 1019
GLY 1051 0.34 GLY 1068 -0.08 GLY 1094
GLY 1051 0.26 HIS 1069 -0.07 THR 1004
GLY 1049 0.24 LYS 1070 -0.07 GLN 1092
GLY 1049 0.28 ALA 1071 -0.07 PRO 1079
ILE 1050 0.30 ILE 1072 -0.13 ILE 1047
ILE 1050 0.38 GLY 1073 -0.17 GLY 1049
ILE 1050 0.46 THR 1074 -0.18 ILE 1047
GLY 1049 0.43 VAL 1075 -0.10 ILE 1047
ILE 1050 0.51 LEU 1076 -0.08 PRO 1079
GLY 1049 0.43 VAL 1077 -0.09 PRO 1079
GLY 1051 0.45 GLY 1078 -0.11 PRO 1079
GLY 1051 0.62 PRO 1079 -0.18 ILE 1054
GLY 1051 0.76 THR 1080 -0.17 PRO 1079
GLY 1051 1.11 PRO 1081 -0.16 ARG 1008
GLY 1051 0.93 VAL 1082 -0.15 GLU 1034
GLY 1051 0.71 ASN 1083 -0.11 ARG 1008
GLY 1051 0.55 ILE 1084 -0.08 PRO 1079
GLY 1051 0.55 ILE 1084 -0.08 PRO 1079
GLY 1049 0.41 ILE 1085 -0.08 PRO 1079
ILE 1050 0.51 GLY 1086 -0.11 PRO 1079
ILE 1050 0.53 ARG 1087 -0.11 PRO 1079
ILE 1050 0.51 ASN 1088 -0.10 PRO 1079
ILE 1050 0.40 LEU 1089 -0.09 PRO 1079
ILE 1050 0.37 LEU 1090 -0.08 PRO 1079
ILE 1050 0.40 THR 1091 -0.09 PRO 1081
ILE 1050 0.40 THR 1091 -0.09 PRO 1081
ILE 1050 0.40 THR 1091 -0.09 PRO 1081
ILE 1050 0.35 GLN 1092 -0.09 PRO 1079
ILE 1050 0.28 ILE 1093 -0.07 HIS 1069
ILE 1050 0.29 GLY 1094 -0.10 THR 1004
ILE 1050 0.28 CYS 1095 -0.10 VAL 1011
ILE 1050 0.30 THR 1096 -0.13 VAL 1011
ILE 1050 0.29 LEU 1097 -0.15 VAL 1011
GLY 1051 0.23 ASN 1098 -0.15 VAL 1011
GLY 1051 0.21 PHE 1099 -0.11 VAL 1011

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.