CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 101  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0664
PRO 10010.0361
GLN 10020.0483
ILE 10030.0122
THR 10040.0144
LEU 10050.0077
TRP 10060.0061
LYS 10070.0085
LYS 10070.0091
ARG 10080.0089
ARG 10080.0088
PRO 10090.0092
LEU 10100.0089
VAL 10110.0105
THR 10120.0175
ILE 10130.0159
LYS 10140.0180
ILE 10150.0158
GLY 10160.0084
GLY 10170.0494
GLN 10180.0292
LEU 10190.0490
LYS 10200.0179
GLU 10210.0123
GLU 10210.0120
ALA 10220.0066
LEU 10230.0053
LEU 10240.0044
ASP 10250.0085
THR 10260.0063
GLY 10270.0161
ALA 10280.0151
ASP 10290.0294
ASP 10300.0142
THR 10310.0069
VAL 10320.0078
VAL 10320.0078
LEU 10330.0088
GLU 10340.0098
GLU 10350.0136
MET 10360.0127
MET 10360.0126
ASN 10370.0247
LEU 10380.0124
PRO 10390.0202
GLY 10400.0571
ARG 10410.0312
TRP 10420.0123
LYS 10430.0125
PRO 10440.0117
LYS 10450.0108
MET 10460.0192
ILE 10470.0097
GLY 10480.0124
GLY 10490.0279
ILE 10500.0130
GLY 10510.0097
GLY 10520.0304
PHE 10530.0074
ILE 10540.0084
LYS 10550.0115
VAL 10560.0042
ARG 10570.0143
GLN 10580.0129
TYR 10590.0116
ASP 10600.0092
GLN 10610.0225
ILE 10620.0220
LEU 10630.0443
ILE 10640.0221
ILE 10640.0221
GLU 10650.0110
ILE 10660.0084
CYS 10670.0176
GLY 10680.0664
HIS 10690.0426
LYS 10700.0440
ALA 10710.0312
ILE 10720.0377
GLY 10730.0219
THR 10740.0128
VAL 10750.0087
LEU 10760.0103
VAL 10770.0140
GLY 10780.0098
PRO 10790.0065
THR 10800.0097
PRO 10810.0094
VAL 10820.0084
ASN 10830.0091
ILE 10840.0060
ILE 10840.0060
ILE 10850.0038
GLY 10860.0027
ARG 10870.0029
ASN 10880.0125
LEU 10890.0070
LEU 10900.0068
THR 10910.0059
THR 10910.0059
THR 10910.0057
GLN 10920.0009
ILE 10930.0151
GLY 10940.0135
CYS 10950.0115
THR 10960.0094
LEU 10970.0163
ASN 10980.0428
PHE 10990.0332
PRO 10010.0361
GLN 10020.0483
ILE 10030.0122
THR 10040.0144
LEU 10050.0077
TRP 10060.0061
LYS 10070.0085
LYS 10070.0091
ARG 10080.0089
ARG 10080.0088
PRO 10090.0092
LEU 10100.0089
VAL 10110.0105
THR 10120.0175
ILE 10130.0159
LYS 10140.0180
ILE 10150.0158
GLY 10160.0084
GLY 10170.0494
GLN 10180.0292
LEU 10190.0490
LYS 10200.0179
GLU 10210.0123
GLU 10210.0120
ALA 10220.0066
LEU 10230.0053
LEU 10240.0044
ASP 10250.0085
THR 10260.0063
GLY 10270.0161
ALA 10280.0151
ASP 10290.0294
ASP 10300.0142
THR 10310.0069
VAL 10320.0078
VAL 10320.0078
LEU 10330.0088
GLU 10340.0098
GLU 10350.0136
MET 10360.0127
MET 10360.0126
ASN 10370.0247
LEU 10380.0124
PRO 10390.0202
GLY 10400.0571
ARG 10410.0312
TRP 10420.0123
LYS 10430.0125
PRO 10440.0117
LYS 10450.0108
MET 10460.0192
ILE 10470.0097
GLY 10480.0124
GLY 10490.0279
ILE 10500.0130
GLY 10510.0097
GLY 10520.0304
PHE 10530.0074
ILE 10540.0084
LYS 10550.0115
VAL 10560.0042
ARG 10570.0143
GLN 10580.0129
TYR 10590.0116
ASP 10600.0092
GLN 10610.0225
ILE 10620.0220
LEU 10630.0444
ILE 10640.0221
ILE 10640.0221
GLU 10650.0110
ILE 10660.0084
CYS 10670.0176
GLY 10680.0664
HIS 10690.0426
LYS 10700.0440
ALA 10710.0312
ILE 10720.0377
GLY 10730.0219
THR 10740.0128
VAL 10750.0087
LEU 10760.0103
VAL 10770.0140
GLY 10780.0098
PRO 10790.0065
THR 10800.0097
PRO 10810.0094
VAL 10820.0084
ASN 10830.0091
ILE 10840.0060
ILE 10840.0060
ILE 10850.0038
GLY 10860.0027
ARG 10870.0029
ASN 10880.0125
LEU 10890.0070
LEU 10900.0068
THR 10910.0059
THR 10910.0059
THR 10910.0057
GLN 10920.0009
ILE 10930.0151
GLY 10940.0135
CYS 10950.0115
THR 10960.0094
LEU 10970.0163
ASN 10980.0428
PHE 10990.0332

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.