CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0837
PRO 10010.0837
GLN 10020.0248
ILE 10030.0327
THR 10040.0124
LEU 10050.0108
TRP 10060.0180
LYS 10070.0140
LYS 10070.0139
ARG 10080.0145
ARG 10080.0146
PRO 10090.0081
LEU 10100.0138
VAL 10110.0111
THR 10120.0119
ILE 10130.0137
LYS 10140.0115
ILE 10150.0112
GLY 10160.0107
GLY 10170.0626
GLN 10180.0206
LEU 10190.0205
LYS 10200.0251
GLU 10210.0183
GLU 10210.0183
ALA 10220.0111
LEU 10230.0096
LEU 10240.0115
ASP 10250.0162
THR 10260.0140
GLY 10270.0138
ALA 10280.0221
ASP 10290.0215
ASP 10300.0167
THR 10310.0157
VAL 10320.0152
VAL 10320.0150
LEU 10330.0113
GLU 10340.0188
GLU 10350.0129
MET 10360.0129
MET 10360.0129
ASN 10370.0155
LEU 10380.0148
PRO 10390.0195
GLY 10400.0174
ARG 10410.0130
TRP 10420.0141
LYS 10430.0110
PRO 10440.0104
LYS 10450.0089
MET 10460.0036
ILE 10470.0044
GLY 10480.0191
GLY 10490.0138
ILE 10500.0064
GLY 10510.0031
GLY 10520.0487
PHE 10530.0087
ILE 10540.0026
LYS 10550.0078
VAL 10560.0051
ARG 10570.0104
GLN 10580.0153
TYR 10590.0122
ASP 10600.0192
GLN 10610.0315
ILE 10620.0246
LEU 10630.0273
ILE 10640.0206
ILE 10640.0206
GLU 10650.0212
ILE 10660.0152
CYS 10670.0038
GLY 10680.0426
HIS 10690.0217
LYS 10700.0128
ALA 10710.0106
ILE 10720.0178
GLY 10730.0176
THR 10740.0146
VAL 10750.0142
LEU 10760.0103
VAL 10770.0019
GLY 10780.0051
PRO 10790.0145
THR 10800.0104
PRO 10810.0287
VAL 10820.0138
ASN 10830.0100
ILE 10840.0102
ILE 10840.0102
ILE 10850.0149
GLY 10860.0175
ARG 10870.0158
ASN 10880.0092
LEU 10890.0121
LEU 10900.0116
THR 10910.0219
THR 10910.0219
THR 10910.0220
GLN 10920.0199
ILE 10930.0108
GLY 10940.0047
CYS 10950.0109
THR 10960.0266
LEU 10970.0148
ASN 10980.0217
PHE 10990.0327
PRO 10010.0837
GLN 10020.0248
ILE 10030.0327
THR 10040.0124
LEU 10050.0108
TRP 10060.0180
LYS 10070.0140
LYS 10070.0139
ARG 10080.0145
ARG 10080.0146
PRO 10090.0081
LEU 10100.0138
VAL 10110.0111
THR 10120.0119
ILE 10130.0137
LYS 10140.0115
ILE 10150.0112
GLY 10160.0107
GLY 10170.0626
GLN 10180.0206
LEU 10190.0205
LYS 10200.0251
GLU 10210.0183
GLU 10210.0183
ALA 10220.0111
LEU 10230.0096
LEU 10240.0115
ASP 10250.0162
THR 10260.0140
GLY 10270.0138
ALA 10280.0221
ASP 10290.0215
ASP 10300.0167
THR 10310.0157
VAL 10320.0152
VAL 10320.0150
LEU 10330.0113
GLU 10340.0188
GLU 10350.0129
MET 10360.0129
MET 10360.0129
ASN 10370.0155
LEU 10380.0148
PRO 10390.0195
GLY 10400.0174
ARG 10410.0130
TRP 10420.0141
LYS 10430.0110
PRO 10440.0104
LYS 10450.0089
MET 10460.0036
ILE 10470.0044
GLY 10480.0191
GLY 10490.0138
ILE 10500.0064
GLY 10510.0031
GLY 10520.0487
PHE 10530.0087
ILE 10540.0026
LYS 10550.0078
VAL 10560.0051
ARG 10570.0104
GLN 10580.0153
TYR 10590.0122
ASP 10600.0192
GLN 10610.0315
ILE 10620.0246
LEU 10630.0273
ILE 10640.0206
ILE 10640.0206
GLU 10650.0212
ILE 10660.0152
CYS 10670.0038
GLY 10680.0426
HIS 10690.0217
LYS 10700.0128
ALA 10710.0106
ILE 10720.0178
GLY 10730.0176
THR 10740.0146
VAL 10750.0142
LEU 10760.0103
VAL 10770.0019
GLY 10780.0051
PRO 10790.0145
THR 10800.0104
PRO 10810.0287
VAL 10820.0138
ASN 10830.0100
ILE 10840.0102
ILE 10840.0102
ILE 10850.0149
GLY 10860.0175
ARG 10870.0158
ASN 10880.0092
LEU 10890.0121
LEU 10900.0116
THR 10910.0219
THR 10910.0219
THR 10910.0220
GLN 10920.0199
ILE 10930.0108
GLY 10940.0047
CYS 10950.0109
THR 10960.0266
LEU 10970.0148
ASN 10980.0217
PHE 10990.0327

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.