CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

CA strain for 2602061631263072433

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1001GLN 1002 0.0937
GLN 1002ILE 1003 -0.0318
ILE 1003THR 1004 0.1412
THR 1004LEU 1005 0.0181
LEU 1005TRP 1006 -0.0579
TRP 1006LYS 1007 0.0691
LYS 1007LYS 1007 0.0097
LYS 1007ARG 1008 0.0114
ARG 1008ARG 1008 -0.0113
ARG 1008PRO 1009 -0.0321
PRO 1009LEU 1010 0.1087
LEU 1010VAL 1011 0.0999
VAL 1011THR 1012 0.1283
THR 1012ILE 1013 0.0072
ILE 1013LYS 1014 0.0492
LYS 1014ILE 1015 0.0342
ILE 1015GLY 1016 0.0274
GLY 1016GLY 1017 0.0024
GLY 1017GLN 1018 0.0460
GLN 1018LEU 1019 0.0600
LEU 1019LYS 1020 0.0052
LYS 1020GLU 1021 0.1107
GLU 1021GLU 1021 0.0030
GLU 1021ALA 1022 -0.0275
ALA 1022LEU 1023 0.0564
LEU 1023LEU 1024 -0.0045
LEU 1024ASP 1025 -0.0181
ASP 1025THR 1026 -0.0080
THR 1026GLY 1027 0.0231
GLY 1027ALA 1028 -0.1127
ALA 1028ASP 1029 0.0167
ASP 1029ASP 1030 -0.2432
ASP 1030THR 1031 -0.0091
THR 1031VAL 1032 -0.0221
VAL 1032VAL 1032 -0.0022
VAL 1032LEU 1033 0.0019
LEU 1033GLU 1034 -0.0089
GLU 1034GLU 1035 0.0098
GLU 1035MET 1036 0.0251
MET 1036MET 1036 0.0067
MET 1036ASN 1037 0.0243
ASN 1037LEU 1038 -0.0145
LEU 1038PRO 1039 0.0514
PRO 1039GLY 1040 0.0804
GLY 1040ARG 1041 0.0441
ARG 1041TRP 1042 0.0480
TRP 1042LYS 1043 -0.0202
LYS 1043PRO 1044 -0.1015
PRO 1044LYS 1045 0.0112
LYS 1045MET 1046 -0.3818
MET 1046ILE 1047 0.2694
ILE 1047GLY 1048 0.1274
GLY 1048GLY 1049 0.0220
GLY 1049ILE 1050 -0.0189
ILE 1050GLY 1051 0.3640
GLY 1051GLY 1052 0.0162
GLY 1052PHE 1053 -0.1689
PHE 1053ILE 1054 0.2175
ILE 1054LYS 1055 0.1294
LYS 1055VAL 1056 0.0016
VAL 1056ARG 1057 0.0875
ARG 1057GLN 1058 -0.0103
GLN 1058TYR 1059 -0.0014
TYR 1059ASP 1060 0.0258
ASP 1060GLN 1061 0.0245
GLN 1061ILE 1062 0.0693
ILE 1062LEU 1063 0.0465
LEU 1063ILE 1064 0.0356
ILE 1064ILE 1064 0.0178
ILE 1064GLU 1065 0.0212
GLU 1065ILE 1066 0.0092
ILE 1066CYS 1067 0.0056
CYS 1067GLY 1068 0.0390
GLY 1068HIS 1069 -0.0521
HIS 1069LYS 1070 0.0841
LYS 1070ALA 1071 -0.0251
ALA 1071ILE 1072 0.0456
ILE 1072GLY 1073 0.0447
GLY 1073THR 1074 0.0861
THR 1074VAL 1075 -0.0049
VAL 1075LEU 1076 0.0851
LEU 1076VAL 1077 -0.0452
VAL 1077GLY 1078 0.0297
GLY 1078PRO 1079 0.0251
PRO 1079THR 1080 -0.0597
THR 1080PRO 1081 0.0402
PRO 1081VAL 1082 0.0973
VAL 1082ASN 1083 -0.0290
ASN 1083ILE 1084 -0.0181
ILE 1084ILE 1084 -0.0410
ILE 1084ILE 1085 -0.0121
ILE 1085GLY 1086 -0.0476
GLY 1086ARG 1087 -0.0402
ARG 1087ASN 1088 -0.1444
ASN 1088LEU 1089 -0.0336
LEU 1089LEU 1090 -0.0490
LEU 1090THR 1091 0.0260
THR 1091THR 1091 -0.0167
THR 1091THR 1091 -0.0020
THR 1091GLN 1092 -0.0675
GLN 1092ILE 1093 0.0157
ILE 1093GLY 1094 -0.0596
GLY 1094CYS 1095 0.0089
CYS 1095THR 1096 -0.0444
THR 1096LEU 1097 -0.0415
LEU 1097ASN 1098 0.0110
ASN 1098PHE 1099 -0.0034
PHE 1099PRO 1001 0.0097
PRO 1001GLN 1002 -0.0937
GLN 1002ILE 1003 0.0318
ILE 1003THR 1004 -0.1412
THR 1004LEU 1005 -0.0181
LEU 1005TRP 1006 0.0579
TRP 1006LYS 1007 -0.0691
LYS 1007LYS 1007 -0.0097
LYS 1007ARG 1008 -0.0114
ARG 1008ARG 1008 0.0113
ARG 1008PRO 1009 0.0321
PRO 1009LEU 1010 -0.1087
LEU 1010VAL 1011 -0.0999
VAL 1011THR 1012 -0.1283
THR 1012ILE 1013 -0.0072
ILE 1013LYS 1014 -0.0492
LYS 1014ILE 1015 -0.0342
ILE 1015GLY 1016 -0.0274
GLY 1016GLY 1017 -0.0024
GLY 1017GLN 1018 -0.0460
GLN 1018LEU 1019 -0.0600
LEU 1019LYS 1020 -0.0052
LYS 1020GLU 1021 -0.1107
GLU 1021GLU 1021 -0.0030
GLU 1021ALA 1022 0.0275
ALA 1022LEU 1023 -0.0564
LEU 1023LEU 1024 0.0045
LEU 1024ASP 1025 0.0181
ASP 1025THR 1026 0.0080
THR 1026GLY 1027 -0.0231
GLY 1027ALA 1028 0.1127
ALA 1028ASP 1029 -0.0167
ASP 1029ASP 1030 0.2432
ASP 1030THR 1031 0.0091
THR 1031VAL 1032 0.0221
VAL 1032VAL 1032 0.0022
VAL 1032LEU 1033 -0.0019
LEU 1033GLU 1034 0.0089
GLU 1034GLU 1035 -0.0098
GLU 1035MET 1036 -0.0251
MET 1036MET 1036 -0.0067
MET 1036ASN 1037 -0.0243
ASN 1037LEU 1038 0.0145
LEU 1038PRO 1039 -0.0514
PRO 1039GLY 1040 -0.0804
GLY 1040ARG 1041 -0.0441
ARG 1041TRP 1042 -0.0480
TRP 1042LYS 1043 0.0202
LYS 1043PRO 1044 0.1015
PRO 1044LYS 1045 -0.0112
LYS 1045MET 1046 0.3818
MET 1046ILE 1047 -0.2694
ILE 1047GLY 1048 -0.1274
GLY 1048GLY 1049 -0.0220
GLY 1049ILE 1050 0.0189
ILE 1050GLY 1051 -0.3640
GLY 1051GLY 1052 -0.0162
GLY 1052PHE 1053 0.1689
PHE 1053ILE 1054 -0.2175
ILE 1054LYS 1055 -0.1295
LYS 1055VAL 1056 -0.0018
VAL 1056ARG 1057 -0.0875
ARG 1057GLN 1058 0.0103
GLN 1058TYR 1059 0.0014
TYR 1059ASP 1060 -0.0258
ASP 1060GLN 1061 -0.0245
GLN 1061ILE 1062 -0.0693
ILE 1062LEU 1063 -0.0465
LEU 1063ILE 1064 -0.0356
ILE 1064ILE 1064 -0.0178
ILE 1064GLU 1065 -0.0212
GLU 1065ILE 1066 -0.0092
ILE 1066CYS 1067 -0.0056
CYS 1067GLY 1068 -0.0390
GLY 1068HIS 1069 0.0521
HIS 1069LYS 1070 -0.0841
LYS 1070ALA 1071 0.0251
ALA 1071ILE 1072 -0.0456
ILE 1072GLY 1073 -0.0447
GLY 1073THR 1074 -0.0861
THR 1074VAL 1075 0.0049
VAL 1075LEU 1076 -0.0851
LEU 1076VAL 1077 0.0452
VAL 1077GLY 1078 -0.0297
GLY 1078PRO 1079 -0.0251
PRO 1079THR 1080 0.0597
THR 1080PRO 1081 -0.0402
PRO 1081VAL 1082 -0.0973
VAL 1082ASN 1083 0.0290
ASN 1083ILE 1084 0.0181
ILE 1084ILE 1084 0.0410
ILE 1084ILE 1085 0.0121
ILE 1085GLY 1086 0.0476
GLY 1086ARG 1087 0.0402
ARG 1087ASN 1088 0.1444
ASN 1088LEU 1089 0.0336
LEU 1089LEU 1090 0.0490
LEU 1090THR 1091 -0.0260
THR 1091THR 1091 0.0167
THR 1091THR 1091 0.0020
THR 1091GLN 1092 0.0675
GLN 1092ILE 1093 -0.0157
ILE 1093GLY 1094 0.0596
GLY 1094CYS 1095 -0.0089
CYS 1095THR 1096 0.0444
THR 1096LEU 1097 0.0415
LEU 1097ASN 1098 -0.0110
ASN 1098PHE 1099 0.0034

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.