CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

CA distance fluctuations for 2602061631263072433

---  normal mode 11  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ILE 1050 0.67 PRO 1001 -0.37 ILE 1050
ILE 1050 0.69 GLN 1002 -0.40 ILE 1050
ILE 1050 0.80 ILE 1003 -0.39 ILE 1050
ILE 1050 0.83 THR 1004 -0.38 ILE 1050
ILE 1050 0.94 LEU 1005 -0.41 ILE 1050
ILE 1050 0.95 TRP 1006 -0.26 GLY 1051
ILE 1050 1.11 LYS 1007 -0.24 GLY 1049
ILE 1050 1.10 LYS 1007 -0.24 GLY 1049
ILE 1050 1.25 ARG 1008 -0.36 GLY 1049
ILE 1050 1.25 ARG 1008 -0.35 GLY 1049
ILE 1050 1.11 PRO 1009 -0.40 GLY 1049
ILE 1050 1.16 LEU 1010 -0.32 GLY 1049
ILE 1050 0.99 VAL 1011 -0.29 GLY 1049
ILE 1050 0.92 THR 1012 -0.23 GLY 1049
ILE 1050 0.83 ILE 1013 -0.28 GLY 1049
GLY 1051 0.73 LYS 1014 -0.24 GLY 1049
GLY 1051 0.67 ILE 1015 -0.27 GLY 1049
GLY 1051 0.59 GLY 1016 -0.22 GLY 1049
GLY 1051 0.62 GLY 1017 -0.16 GLY 1049
GLY 1051 0.73 GLN 1018 -0.15 GLY 1049
GLY 1051 0.82 LEU 1019 -0.15 GLY 1049
GLY 1051 0.95 LYS 1020 -0.19 GLY 1049
GLY 1051 1.07 GLU 1021 -0.23 GLY 1049
GLY 1051 1.07 GLU 1021 -0.23 GLY 1049
ILE 1050 1.13 ALA 1022 -0.38 GLY 1049
ILE 1050 1.21 LEU 1023 -0.51 GLY 1049
ILE 1050 1.00 LEU 1024 -0.59 ILE 1050
ILE 1050 1.00 ASP 1025 -0.81 ILE 1050
ILE 1050 0.76 THR 1026 -0.98 ILE 1050
GLY 1049 0.81 GLY 1027 -1.21 ILE 1050
GLY 1049 0.81 ALA 1028 -1.19 ILE 1050
GLY 1048 0.51 ASP 1029 -1.23 ILE 1050
GLY 1048 0.70 ASP 1030 -1.02 ILE 1050
GLY 1048 0.79 THR 1031 -0.76 ILE 1050
GLY 1048 0.89 VAL 1032 -0.62 ILE 1050
GLY 1048 0.90 VAL 1032 -0.62 GLY 1049
GLY 1051 0.86 LEU 1033 -0.45 GLY 1049
GLY 1051 0.93 GLU 1034 -0.30 GLY 1049
GLY 1051 0.75 GLU 1035 -0.22 GLY 1049
GLY 1051 0.68 MET 1036 -0.20 GLY 1049
GLY 1051 0.68 MET 1036 -0.20 GLY 1049
GLY 1051 0.53 ASN 1037 -0.20 GLY 1049
GLY 1051 0.46 LEU 1038 -0.26 GLY 1049
GLY 1051 0.34 PRO 1039 -0.27 GLY 1051
GLY 1051 0.22 GLY 1040 -0.35 GLY 1051
GLY 1051 0.13 ARG 1041 -0.41 GLY 1051
GLY 1051 0.14 TRP 1042 -0.47 GLY 1051
VAL 1056 0.05 LYS 1043 -0.56 GLY 1051
VAL 1056 0.10 PRO 1044 -0.56 GLY 1051
LYS 1055 0.05 LYS 1045 -0.77 GLY 1051
ILE 1047 0.27 MET 1046 -0.78 GLY 1051
MET 1046 0.27 ILE 1047 -1.04 GLY 1051
VAL 1032 0.90 GLY 1048 -1.15 GLY 1051
GLY 1027 0.90 GLY 1049 -0.71 GLY 1051
VAL 1082 1.44 ILE 1050 -0.34 GLY 1051
VAL 1082 1.40 GLY 1051 0.00 PRO 1001
VAL 1082 0.69 GLY 1052 -0.45 GLY 1051
THR 1080 0.51 PHE 1053 -0.68 GLY 1051
GLY 1051 0.26 ILE 1054 -0.64 GLY 1051
GLY 1051 0.19 LYS 1055 -0.55 GLY 1051
GLY 1051 0.33 VAL 1056 -0.54 GLY 1051
GLY 1051 0.28 ARG 1057 -0.49 GLY 1051
GLY 1048 0.24 GLN 1058 -0.63 GLY 1051
GLY 1051 0.28 TYR 1059 -0.54 GLY 1051
GLY 1051 0.22 ASP 1060 -0.61 GLY 1051
GLY 1051 0.28 GLN 1061 -0.55 GLY 1051
GLY 1051 0.41 ILE 1062 -0.45 GLY 1051
GLY 1051 0.48 LEU 1063 -0.39 GLY 1051
GLY 1051 0.60 ILE 1064 -0.37 GLY 1051
GLY 1051 0.60 ILE 1064 -0.37 GLY 1051
ILE 1050 0.65 GLU 1065 -0.32 GLY 1051
ILE 1050 0.75 ILE 1066 -0.36 ILE 1050
ILE 1050 0.77 CYS 1067 -0.29 GLY 1049
ILE 1050 0.66 GLY 1068 -0.28 GLY 1051
ILE 1050 0.60 HIS 1069 -0.37 ILE 1050
GLY 1051 0.54 LYS 1070 -0.39 ILE 1050
GLY 1051 0.49 ALA 1071 -0.49 ILE 1050
GLY 1051 0.41 ILE 1072 -0.52 ILE 1050
GLY 1051 0.37 GLY 1073 -0.63 ILE 1050
GLY 1048 0.37 THR 1074 -0.69 ILE 1050
GLY 1048 0.50 VAL 1075 -0.60 ILE 1050
GLY 1048 0.54 LEU 1076 -0.62 ILE 1050
GLY 1051 0.59 VAL 1077 -0.43 GLY 1049
GLY 1051 0.64 GLY 1078 -0.41 GLY 1049
GLY 1051 0.81 PRO 1079 -0.40 GLY 1049
GLY 1051 1.04 THR 1080 -0.54 GLY 1049
GLY 1051 1.35 PRO 1081 -0.51 GLY 1049
ILE 1050 1.44 VAL 1082 -0.46 GLY 1049
ILE 1050 1.18 ASN 1083 -0.47 GLY 1049
ILE 1050 1.09 ILE 1084 -0.63 GLY 1049
ILE 1050 1.09 ILE 1084 -0.63 GLY 1049
ILE 1050 0.88 ILE 1085 -0.65 ILE 1050
ILE 1050 0.73 GLY 1086 -0.89 ILE 1050
ILE 1050 0.55 ARG 1087 -0.95 ILE 1050
GLY 1048 0.46 ASN 1088 -0.88 ILE 1050
ILE 1050 0.55 LEU 1089 -0.72 ILE 1050
ILE 1050 0.61 LEU 1090 -0.73 ILE 1050
ILE 1050 0.45 THR 1091 -0.76 ILE 1050
ILE 1050 0.45 THR 1091 -0.76 ILE 1050
ILE 1050 0.45 THR 1091 -0.77 ILE 1050
ILE 1050 0.44 GLN 1092 -0.66 ILE 1050
ILE 1050 0.53 ILE 1093 -0.57 ILE 1050
ILE 1050 0.48 GLY 1094 -0.62 ILE 1050
ILE 1050 0.58 CYS 1095 -0.65 ILE 1050
ILE 1050 0.54 THR 1096 -0.71 ILE 1050
ILE 1050 0.58 LEU 1097 -0.72 ILE 1050
ILE 1050 0.53 ASN 1098 -0.63 ILE 1050
ILE 1050 0.51 PHE 1099 -0.59 ILE 1050
ILE 1050 0.37 PRO 1001 -0.67 ILE 1050
ILE 1050 0.40 GLN 1002 -0.69 ILE 1050
ILE 1050 0.39 ILE 1003 -0.80 ILE 1050
ILE 1050 0.38 THR 1004 -0.83 ILE 1050
ILE 1050 0.41 LEU 1005 -0.94 ILE 1050
GLY 1051 0.26 TRP 1006 -0.95 ILE 1050
GLY 1049 0.24 LYS 1007 -1.11 ILE 1050
GLY 1049 0.24 LYS 1007 -1.10 ILE 1050
GLY 1049 0.36 ARG 1008 -1.25 ILE 1050
GLY 1049 0.35 ARG 1008 -1.25 ILE 1050
GLY 1049 0.40 PRO 1009 -1.11 ILE 1050
GLY 1049 0.32 LEU 1010 -1.16 ILE 1050
GLY 1049 0.29 VAL 1011 -0.99 ILE 1050
GLY 1049 0.23 THR 1012 -0.92 ILE 1050
GLY 1049 0.28 ILE 1013 -0.83 ILE 1050
GLY 1049 0.24 LYS 1014 -0.73 GLY 1051
GLY 1049 0.27 ILE 1015 -0.67 GLY 1051
GLY 1049 0.22 GLY 1016 -0.59 GLY 1051
GLY 1049 0.16 GLY 1017 -0.62 GLY 1051
GLY 1049 0.15 GLN 1018 -0.73 GLY 1051
GLY 1049 0.15 LEU 1019 -0.82 GLY 1051
GLY 1049 0.19 LYS 1020 -0.95 GLY 1051
GLY 1049 0.23 GLU 1021 -1.07 GLY 1051
GLY 1049 0.23 GLU 1021 -1.07 GLY 1051
GLY 1049 0.38 ALA 1022 -1.13 ILE 1050
GLY 1049 0.51 LEU 1023 -1.21 ILE 1050
ILE 1050 0.59 LEU 1024 -1.00 ILE 1050
ILE 1050 0.81 ASP 1025 -1.00 ILE 1050
ILE 1050 0.98 THR 1026 -0.76 ILE 1050
ILE 1050 1.21 GLY 1027 -0.81 GLY 1049
ILE 1050 1.19 ALA 1028 -0.81 GLY 1049
ILE 1050 1.23 ASP 1029 -0.51 GLY 1048
ILE 1050 1.02 ASP 1030 -0.70 GLY 1048
ILE 1050 0.76 THR 1031 -0.79 GLY 1048
ILE 1050 0.62 VAL 1032 -0.89 GLY 1048
GLY 1049 0.62 VAL 1032 -0.90 GLY 1048
GLY 1049 0.45 LEU 1033 -0.86 GLY 1051
GLY 1049 0.30 GLU 1034 -0.93 GLY 1051
GLY 1049 0.22 GLU 1035 -0.75 GLY 1051
GLY 1049 0.20 MET 1036 -0.68 GLY 1051
GLY 1049 0.20 MET 1036 -0.68 GLY 1051
GLY 1049 0.20 ASN 1037 -0.53 GLY 1051
GLY 1049 0.26 LEU 1038 -0.46 GLY 1051
GLY 1051 0.27 PRO 1039 -0.34 GLY 1051
GLY 1051 0.35 GLY 1040 -0.22 GLY 1051
GLY 1051 0.41 ARG 1041 -0.13 GLY 1051
GLY 1051 0.47 TRP 1042 -0.14 GLY 1051
GLY 1051 0.56 LYS 1043 -0.05 VAL 1056
GLY 1051 0.56 PRO 1044 -0.10 VAL 1056
GLY 1051 0.77 LYS 1045 -0.05 LYS 1055
GLY 1051 0.78 MET 1046 -0.27 ILE 1047
GLY 1051 1.04 ILE 1047 -0.27 MET 1046
GLY 1051 1.15 GLY 1048 -0.90 VAL 1032
GLY 1051 0.71 GLY 1049 -0.90 GLY 1027
GLY 1051 0.34 ILE 1050 -1.44 VAL 1082
PRO 1001 0.00 GLY 1051 -1.40 VAL 1082
GLY 1051 0.45 GLY 1052 -0.69 VAL 1082
GLY 1051 0.68 PHE 1053 -0.51 THR 1080
GLY 1051 0.64 ILE 1054 -0.26 GLY 1051
GLY 1051 0.55 LYS 1055 -0.19 GLY 1051
GLY 1051 0.54 VAL 1056 -0.33 GLY 1051
GLY 1051 0.49 ARG 1057 -0.28 GLY 1051
GLY 1051 0.63 GLN 1058 -0.24 GLY 1048
GLY 1051 0.54 TYR 1059 -0.28 GLY 1051
GLY 1051 0.61 ASP 1060 -0.22 GLY 1051
GLY 1051 0.55 GLN 1061 -0.28 GLY 1051
GLY 1051 0.45 ILE 1062 -0.41 GLY 1051
GLY 1051 0.39 LEU 1063 -0.48 GLY 1051
GLY 1051 0.37 ILE 1064 -0.60 GLY 1051
GLY 1051 0.37 ILE 1064 -0.60 GLY 1051
GLY 1051 0.32 GLU 1065 -0.65 ILE 1050
ILE 1050 0.36 ILE 1066 -0.75 ILE 1050
GLY 1049 0.29 CYS 1067 -0.77 ILE 1050
GLY 1051 0.28 GLY 1068 -0.66 ILE 1050
ILE 1050 0.37 HIS 1069 -0.60 ILE 1050
ILE 1050 0.39 LYS 1070 -0.54 GLY 1051
ILE 1050 0.49 ALA 1071 -0.49 GLY 1051
ILE 1050 0.52 ILE 1072 -0.41 GLY 1051
ILE 1050 0.63 GLY 1073 -0.37 GLY 1051
ILE 1050 0.69 THR 1074 -0.37 GLY 1048
ILE 1050 0.60 VAL 1075 -0.50 GLY 1048
ILE 1050 0.62 LEU 1076 -0.54 GLY 1048
GLY 1049 0.43 VAL 1077 -0.59 GLY 1051
GLY 1049 0.41 GLY 1078 -0.64 GLY 1051
GLY 1049 0.40 PRO 1079 -0.81 GLY 1051
GLY 1049 0.54 THR 1080 -1.04 GLY 1051
GLY 1049 0.51 PRO 1081 -1.35 GLY 1051
GLY 1049 0.46 VAL 1082 -1.44 ILE 1050
GLY 1049 0.47 ASN 1083 -1.18 ILE 1050
GLY 1049 0.63 ILE 1084 -1.09 ILE 1050
GLY 1049 0.63 ILE 1084 -1.09 ILE 1050
ILE 1050 0.65 ILE 1085 -0.88 ILE 1050
ILE 1050 0.89 GLY 1086 -0.73 ILE 1050
ILE 1050 0.95 ARG 1087 -0.55 ILE 1050
ILE 1050 0.88 ASN 1088 -0.46 GLY 1048
ILE 1050 0.72 LEU 1089 -0.55 ILE 1050
ILE 1050 0.73 LEU 1090 -0.61 ILE 1050
ILE 1050 0.76 THR 1091 -0.45 ILE 1050
ILE 1050 0.76 THR 1091 -0.45 ILE 1050
ILE 1050 0.77 THR 1091 -0.45 ILE 1050
ILE 1050 0.66 GLN 1092 -0.44 ILE 1050
ILE 1050 0.57 ILE 1093 -0.53 ILE 1050
ILE 1050 0.62 GLY 1094 -0.48 ILE 1050
ILE 1050 0.65 CYS 1095 -0.58 ILE 1050
ILE 1050 0.71 THR 1096 -0.54 ILE 1050
ILE 1050 0.72 LEU 1097 -0.58 ILE 1050
ILE 1050 0.63 ASN 1098 -0.53 ILE 1050
ILE 1050 0.59 PHE 1099 -0.51 ILE 1050

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.