CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1922
PRO 10010.0067
GLN 10020.0048
ILE 10030.0044
THR 10040.0085
LEU 10050.0081
TRP 10060.0104
LYS 10070.0096
LYS 10070.0096
ARG 10080.0066
ARG 10080.0066
PRO 10090.0039
LEU 10100.0004
VAL 10110.0063
THR 10120.0106
ILE 10130.0088
LYS 10140.0111
ILE 10150.0075
GLY 10160.0082
GLY 10170.0139
GLN 10180.0141
LEU 10190.0154
LYS 10200.0115
GLU 10210.0085
GLU 10210.0084
ALA 10220.0034
LEU 10230.0015
LEU 10240.0022
ASP 10250.0038
THR 10260.0049
GLY 10270.0048
ALA 10280.0068
ASP 10290.0086
ASP 10300.0087
THR 10310.0067
VAL 10320.0086
VAL 10320.0086
LEU 10330.0090
GLU 10340.0123
GLU 10350.0135
MET 10360.0125
MET 10360.0125
ASN 10370.0120
LEU 10380.0082
PRO 10390.0079
GLY 10400.0107
ARG 10410.0253
TRP 10420.0067
LYS 10430.0127
PRO 10440.0164
LYS 10450.0144
MET 10460.0112
ILE 10470.0151
GLY 10480.0343
GLY 10490.0474
ILE 10500.0365
GLY 10510.1922
GLY 10520.0703
PHE 10530.0260
ILE 10540.0122
LYS 10550.0112
VAL 10560.0153
ARG 10570.0136
GLN 10580.0128
TYR 10590.0104
ASP 10600.0128
GLN 10610.0104
ILE 10620.0053
LEU 10630.0074
ILE 10640.0067
ILE 10640.0068
GLU 10650.0105
ILE 10660.0080
CYS 10670.0102
GLY 10680.0155
HIS 10690.0135
LYS 10700.0134
ALA 10710.0105
ILE 10720.0096
GLY 10730.0088
THR 10740.0094
VAL 10750.0082
LEU 10760.0114
VAL 10770.0116
GLY 10780.0129
PRO 10790.0096
THR 10800.0084
PRO 10810.0158
VAL 10820.0061
ASN 10830.0075
ILE 10840.0048
ILE 10840.0048
ILE 10850.0028
GLY 10860.0055
ARG 10870.0073
ASN 10880.0090
LEU 10890.0069
LEU 10900.0069
THR 10910.0098
THR 10910.0098
THR 10910.0097
GLN 10920.0111
ILE 10930.0106
GLY 10940.0110
CYS 10950.0076
THR 10960.0069
LEU 10970.0047
ASN 10980.0051
PHE 10990.0089
PRO 10010.0067
GLN 10020.0048
ILE 10030.0044
THR 10040.0085
LEU 10050.0081
TRP 10060.0104
LYS 10070.0096
LYS 10070.0096
ARG 10080.0066
ARG 10080.0066
PRO 10090.0039
LEU 10100.0004
VAL 10110.0063
THR 10120.0106
ILE 10130.0088
LYS 10140.0111
ILE 10150.0075
GLY 10160.0082
GLY 10170.0139
GLN 10180.0141
LEU 10190.0154
LYS 10200.0115
GLU 10210.0085
GLU 10210.0084
ALA 10220.0034
LEU 10230.0015
LEU 10240.0022
ASP 10250.0038
THR 10260.0049
GLY 10270.0048
ALA 10280.0068
ASP 10290.0086
ASP 10300.0087
THR 10310.0067
VAL 10320.0086
VAL 10320.0086
LEU 10330.0090
GLU 10340.0123
GLU 10350.0135
MET 10360.0125
MET 10360.0125
ASN 10370.0120
LEU 10380.0082
PRO 10390.0079
GLY 10400.0107
ARG 10410.0253
TRP 10420.0067
LYS 10430.0127
PRO 10440.0164
LYS 10450.0144
MET 10460.0112
ILE 10470.0151
GLY 10480.0343
GLY 10490.0474
ILE 10500.0365
GLY 10510.1922
GLY 10520.0703
PHE 10530.0260
ILE 10540.0122
LYS 10550.0112
VAL 10560.0153
ARG 10570.0136
GLN 10580.0128
TYR 10590.0104
ASP 10600.0128
GLN 10610.0104
ILE 10620.0053
LEU 10630.0074
ILE 10640.0067
ILE 10640.0068
GLU 10650.0105
ILE 10660.0080
CYS 10670.0102
GLY 10680.0155
HIS 10690.0135
LYS 10700.0134
ALA 10710.0105
ILE 10720.0096
GLY 10730.0088
THR 10740.0094
VAL 10750.0082
LEU 10760.0114
VAL 10770.0116
GLY 10780.0129
PRO 10790.0096
THR 10800.0084
PRO 10810.0158
VAL 10820.0061
ASN 10830.0075
ILE 10840.0048
ILE 10840.0048
ILE 10850.0028
GLY 10860.0055
ARG 10870.0073
ASN 10880.0090
LEU 10890.0069
LEU 10900.0069
THR 10910.0098
THR 10910.0098
THR 10910.0097
GLN 10920.0111
ILE 10930.0106
GLY 10940.0110
CYS 10950.0076
THR 10960.0069
LEU 10970.0047
ASN 10980.0051
PHE 10990.0089

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.