CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 19  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1544
PRO 10010.0140
GLN 10020.0108
ILE 10030.0103
THR 10040.0100
LEU 10050.0091
TRP 10060.0124
LYS 10070.0168
LYS 10070.0169
ARG 10080.0117
ARG 10080.0118
PRO 10090.0109
LEU 10100.0122
VAL 10110.0112
THR 10120.0089
ILE 10130.0083
LYS 10140.0099
ILE 10150.0123
GLY 10160.0199
GLY 10170.0231
GLN 10180.0173
LEU 10190.0093
LYS 10200.0101
GLU 10210.0091
GLU 10210.0091
ALA 10220.0094
LEU 10230.0097
LEU 10240.0089
ASP 10250.0089
THR 10260.0077
GLY 10270.0077
ALA 10280.0105
ASP 10290.0105
ASP 10300.0108
THR 10310.0103
VAL 10320.0113
VAL 10320.0114
LEU 10330.0127
GLU 10340.0187
GLU 10350.0228
MET 10360.0242
MET 10360.0241
ASN 10370.0284
LEU 10380.0232
PRO 10390.0278
GLY 10400.0301
ARG 10410.0228
TRP 10420.0153
LYS 10430.0209
PRO 10440.0215
LYS 10450.0227
MET 10460.0292
ILE 10470.0304
GLY 10480.0517
GLY 10490.0239
ILE 10500.0558
GLY 10510.1544
GLY 10520.0272
PHE 10530.0128
ILE 10540.0119
LYS 10550.0158
VAL 10560.0100
ARG 10570.0111
GLN 10580.0128
TYR 10590.0133
ASP 10600.0122
GLN 10610.0167
ILE 10620.0138
LEU 10630.0150
ILE 10640.0115
ILE 10640.0115
GLU 10650.0122
ILE 10660.0106
CYS 10670.0126
GLY 10680.0162
HIS 10690.0152
LYS 10700.0159
ALA 10710.0142
ILE 10720.0143
GLY 10730.0119
THR 10740.0097
VAL 10750.0094
LEU 10760.0090
VAL 10770.0112
GLY 10780.0132
PRO 10790.0200
THR 10800.0201
PRO 10810.0191
VAL 10820.0150
ASN 10830.0126
ILE 10840.0107
ILE 10840.0107
ILE 10850.0092
GLY 10860.0093
ARG 10870.0082
ASN 10880.0093
LEU 10890.0094
LEU 10900.0082
THR 10910.0074
THR 10910.0074
THR 10910.0074
GLN 10920.0099
ILE 10930.0105
GLY 10940.0082
CYS 10950.0079
THR 10960.0072
LEU 10970.0077
ASN 10980.0079
PHE 10990.0105
PRO 10010.0140
GLN 10020.0108
ILE 10030.0103
THR 10040.0100
LEU 10050.0091
TRP 10060.0124
LYS 10070.0168
LYS 10070.0169
ARG 10080.0117
ARG 10080.0118
PRO 10090.0109
LEU 10100.0122
VAL 10110.0112
THR 10120.0089
ILE 10130.0083
LYS 10140.0099
ILE 10150.0123
GLY 10160.0199
GLY 10170.0231
GLN 10180.0173
LEU 10190.0093
LYS 10200.0101
GLU 10210.0091
GLU 10210.0091
ALA 10220.0094
LEU 10230.0097
LEU 10240.0089
ASP 10250.0089
THR 10260.0077
GLY 10270.0077
ALA 10280.0105
ASP 10290.0105
ASP 10300.0108
THR 10310.0103
VAL 10320.0113
VAL 10320.0114
LEU 10330.0127
GLU 10340.0187
GLU 10350.0228
MET 10360.0242
MET 10360.0241
ASN 10370.0284
LEU 10380.0232
PRO 10390.0278
GLY 10400.0301
ARG 10410.0228
TRP 10420.0153
LYS 10430.0209
PRO 10440.0215
LYS 10450.0227
MET 10460.0292
ILE 10470.0304
GLY 10480.0517
GLY 10490.0239
ILE 10500.0558
GLY 10510.1544
GLY 10520.0272
PHE 10530.0128
ILE 10540.0119
LYS 10550.0158
VAL 10560.0100
ARG 10570.0111
GLN 10580.0128
TYR 10590.0133
ASP 10600.0122
GLN 10610.0167
ILE 10620.0138
LEU 10630.0150
ILE 10640.0115
ILE 10640.0115
GLU 10650.0122
ILE 10660.0106
CYS 10670.0126
GLY 10680.0162
HIS 10690.0152
LYS 10700.0159
ALA 10710.0142
ILE 10720.0143
GLY 10730.0119
THR 10740.0097
VAL 10750.0094
LEU 10760.0090
VAL 10770.0112
GLY 10780.0132
PRO 10790.0200
THR 10800.0201
PRO 10810.0191
VAL 10820.0150
ASN 10830.0126
ILE 10840.0107
ILE 10840.0107
ILE 10850.0092
GLY 10860.0093
ARG 10870.0082
ASN 10880.0093
LEU 10890.0094
LEU 10900.0082
THR 10910.0074
THR 10910.0074
THR 10910.0074
GLN 10920.0099
ILE 10930.0105
GLY 10940.0082
CYS 10950.0079
THR 10960.0072
LEU 10970.0077
ASN 10980.0079
PHE 10990.0105

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.