CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0772
PRO 10010.0080
GLN 10020.0106
ILE 10030.0076
THR 10040.0158
LEU 10050.0109
TRP 10060.0275
LYS 10070.0392
LYS 10070.0395
ARG 10080.0092
ARG 10080.0094
PRO 10090.0128
LEU 10100.0220
VAL 10110.0227
THR 10120.0316
ILE 10130.0249
LYS 10140.0278
ILE 10150.0181
GLY 10160.0184
GLY 10170.0382
GLN 10180.0282
LEU 10190.0323
LYS 10200.0253
GLU 10210.0282
GLU 10210.0282
ALA 10220.0240
LEU 10230.0202
LEU 10240.0160
ASP 10250.0147
THR 10260.0053
GLY 10270.0088
ALA 10280.0187
ASP 10290.0219
ASP 10300.0172
THR 10310.0159
VAL 10320.0132
VAL 10320.0134
LEU 10330.0106
GLU 10340.0115
GLU 10350.0110
MET 10360.0114
MET 10360.0113
ASN 10370.0219
LEU 10380.0125
PRO 10390.0104
GLY 10400.0155
ARG 10410.0161
TRP 10420.0191
LYS 10430.0297
PRO 10440.0241
LYS 10450.0122
MET 10460.0184
ILE 10470.0176
GLY 10480.0772
GLY 10490.0629
ILE 10500.0386
GLY 10510.0245
GLY 10520.0202
PHE 10530.0274
ILE 10540.0019
LYS 10550.0043
VAL 10560.0109
ARG 10570.0144
GLN 10580.0148
TYR 10590.0103
ASP 10600.0092
GLN 10610.0034
ILE 10620.0043
LEU 10630.0115
ILE 10640.0139
ILE 10640.0140
GLU 10650.0209
ILE 10660.0200
CYS 10670.0244
GLY 10680.0283
HIS 10690.0146
LYS 10700.0149
ALA 10710.0077
ILE 10720.0047
GLY 10730.0058
THR 10740.0104
VAL 10750.0091
LEU 10760.0104
VAL 10770.0088
GLY 10780.0133
PRO 10790.0203
THR 10800.0175
PRO 10810.0273
VAL 10820.0202
ASN 10830.0200
ILE 10840.0209
ILE 10840.0209
ILE 10850.0178
GLY 10860.0165
ARG 10870.0137
ASN 10880.0156
LEU 10890.0120
LEU 10900.0097
THR 10910.0092
THR 10910.0092
THR 10910.0096
GLN 10920.0076
ILE 10930.0056
GLY 10940.0048
CYS 10950.0038
THR 10960.0063
LEU 10970.0035
ASN 10980.0064
PHE 10990.0064
PRO 10010.0080
GLN 10020.0106
ILE 10030.0076
THR 10040.0158
LEU 10050.0109
TRP 10060.0275
LYS 10070.0392
LYS 10070.0395
ARG 10080.0092
ARG 10080.0094
PRO 10090.0128
LEU 10100.0220
VAL 10110.0227
THR 10120.0316
ILE 10130.0249
LYS 10140.0278
ILE 10150.0181
GLY 10160.0184
GLY 10170.0382
GLN 10180.0282
LEU 10190.0323
LYS 10200.0253
GLU 10210.0282
GLU 10210.0282
ALA 10220.0240
LEU 10230.0202
LEU 10240.0160
ASP 10250.0147
THR 10260.0053
GLY 10270.0088
ALA 10280.0187
ASP 10290.0219
ASP 10300.0172
THR 10310.0159
VAL 10320.0132
VAL 10320.0134
LEU 10330.0106
GLU 10340.0115
GLU 10350.0110
MET 10360.0114
MET 10360.0113
ASN 10370.0219
LEU 10380.0125
PRO 10390.0104
GLY 10400.0155
ARG 10410.0161
TRP 10420.0191
LYS 10430.0297
PRO 10440.0241
LYS 10450.0122
MET 10460.0184
ILE 10470.0176
GLY 10480.0772
GLY 10490.0629
ILE 10500.0386
GLY 10510.0245
GLY 10520.0202
PHE 10530.0274
ILE 10540.0019
LYS 10550.0043
VAL 10560.0109
ARG 10570.0144
GLN 10580.0148
TYR 10590.0103
ASP 10600.0092
GLN 10610.0034
ILE 10620.0043
LEU 10630.0115
ILE 10640.0139
ILE 10640.0140
GLU 10650.0209
ILE 10660.0200
CYS 10670.0244
GLY 10680.0283
HIS 10690.0146
LYS 10700.0149
ALA 10710.0077
ILE 10720.0047
GLY 10730.0058
THR 10740.0104
VAL 10750.0091
LEU 10760.0104
VAL 10770.0088
GLY 10780.0133
PRO 10790.0203
THR 10800.0175
PRO 10810.0273
VAL 10820.0202
ASN 10830.0200
ILE 10840.0209
ILE 10840.0209
ILE 10850.0178
GLY 10860.0165
ARG 10870.0137
ASN 10880.0156
LEU 10890.0120
LEU 10900.0097
THR 10910.0092
THR 10910.0092
THR 10910.0096
GLN 10920.0076
ILE 10930.0056
GLY 10940.0048
CYS 10950.0038
THR 10960.0063
LEU 10970.0035
ASN 10980.0064
PHE 10990.0064

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.