CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 31  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0642
PRO 10010.0024
GLN 10020.0026
ILE 10030.0024
THR 10040.0041
LEU 10050.0031
TRP 10060.0037
LYS 10070.0048
LYS 10070.0049
ARG 10080.0032
ARG 10080.0032
PRO 10090.0022
LEU 10100.0035
VAL 10110.0032
THR 10120.0039
ILE 10130.0016
LYS 10140.0025
ILE 10150.0005
GLY 10160.0013
GLY 10170.0025
GLN 10180.0043
LEU 10190.0054
LYS 10200.0046
GLU 10210.0047
GLU 10210.0047
ALA 10220.0044
LEU 10230.0038
LEU 10240.0022
ASP 10250.0030
THR 10260.0010
GLY 10270.0009
ALA 10280.0030
ASP 10290.0031
ASP 10300.0065
THR 10310.0069
VAL 10320.0066
VAL 10320.0066
LEU 10330.0069
GLU 10340.0077
GLU 10350.0074
MET 10360.0067
MET 10360.0067
ASN 10370.0058
LEU 10380.0029
PRO 10390.0043
GLY 10400.0113
ARG 10410.0081
TRP 10420.0112
LYS 10430.0113
PRO 10440.0074
LYS 10450.0121
MET 10460.0264
ILE 10470.0108
GLY 10480.0203
GLY 10490.0163
ILE 10500.0272
GLY 10510.0642
GLY 10520.0547
PHE 10530.0367
ILE 10540.0233
LYS 10550.0164
VAL 10560.0039
ARG 10570.0081
GLN 10580.0074
TYR 10590.0057
ASP 10600.0083
GLN 10610.0215
ILE 10620.0059
LEU 10630.0077
ILE 10640.0033
ILE 10640.0033
GLU 10650.0039
ILE 10660.0021
CYS 10670.0043
GLY 10680.0068
HIS 10690.0040
LYS 10700.0053
ALA 10710.0045
ILE 10720.0073
GLY 10730.0119
THR 10740.0083
VAL 10750.0065
LEU 10760.0075
VAL 10770.0066
GLY 10780.0044
PRO 10790.0080
THR 10800.0047
PRO 10810.0129
VAL 10820.0070
ASN 10830.0075
ILE 10840.0063
ILE 10840.0063
ILE 10850.0052
GLY 10860.0051
ARG 10870.0039
ASN 10880.0060
LEU 10890.0058
LEU 10900.0041
THR 10910.0042
THR 10910.0042
THR 10910.0043
GLN 10920.0039
ILE 10930.0024
GLY 10940.0025
CYS 10950.0025
THR 10960.0025
LEU 10970.0017
ASN 10980.0021
PHE 10990.0020
PRO 10010.0024
GLN 10020.0026
ILE 10030.0024
THR 10040.0041
LEU 10050.0031
TRP 10060.0037
LYS 10070.0048
LYS 10070.0049
ARG 10080.0032
ARG 10080.0032
PRO 10090.0022
LEU 10100.0035
VAL 10110.0032
THR 10120.0039
ILE 10130.0016
LYS 10140.0025
ILE 10150.0005
GLY 10160.0013
GLY 10170.0025
GLN 10180.0043
LEU 10190.0054
LYS 10200.0046
GLU 10210.0047
GLU 10210.0047
ALA 10220.0044
LEU 10230.0038
LEU 10240.0022
ASP 10250.0030
THR 10260.0010
GLY 10270.0009
ALA 10280.0030
ASP 10290.0031
ASP 10300.0065
THR 10310.0069
VAL 10320.0066
VAL 10320.0066
LEU 10330.0069
GLU 10340.0077
GLU 10350.0074
MET 10360.0067
MET 10360.0067
ASN 10370.0058
LEU 10380.0029
PRO 10390.0043
GLY 10400.0113
ARG 10410.0081
TRP 10420.0112
LYS 10430.0113
PRO 10440.0074
LYS 10450.0121
MET 10460.0264
ILE 10470.0108
GLY 10480.0203
GLY 10490.0163
ILE 10500.0272
GLY 10510.0642
GLY 10520.0547
PHE 10530.0367
ILE 10540.0233
LYS 10550.0164
VAL 10560.0039
ARG 10570.0081
GLN 10580.0074
TYR 10590.0057
ASP 10600.0083
GLN 10610.0215
ILE 10620.0059
LEU 10630.0077
ILE 10640.0033
ILE 10640.0033
GLU 10650.0039
ILE 10660.0021
CYS 10670.0043
GLY 10680.0068
HIS 10690.0040
LYS 10700.0053
ALA 10710.0045
ILE 10720.0073
GLY 10730.0119
THR 10740.0083
VAL 10750.0065
LEU 10760.0075
VAL 10770.0066
GLY 10780.0044
PRO 10790.0080
THR 10800.0047
PRO 10810.0129
VAL 10820.0070
ASN 10830.0075
ILE 10840.0063
ILE 10840.0063
ILE 10850.0052
GLY 10860.0051
ARG 10870.0039
ASN 10880.0060
LEU 10890.0058
LEU 10900.0041
THR 10910.0042
THR 10910.0042
THR 10910.0043
GLN 10920.0039
ILE 10930.0024
GLY 10940.0025
CYS 10950.0025
THR 10960.0025
LEU 10970.0017
ASN 10980.0021
PHE 10990.0020

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.