CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 35  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0989
PRO 10010.0059
GLN 10020.0045
ILE 10030.0082
THR 10040.0163
LEU 10050.0123
TRP 10060.0253
LYS 10070.0557
LYS 10070.0560
ARG 10080.0190
ARG 10080.0192
PRO 10090.0176
LEU 10100.0211
VAL 10110.0156
THR 10120.0162
ILE 10130.0104
LYS 10140.0106
ILE 10150.0088
GLY 10160.0123
GLY 10170.0328
GLN 10180.0250
LEU 10190.0205
LYS 10200.0202
GLU 10210.0192
GLU 10210.0192
ALA 10220.0162
LEU 10230.0139
LEU 10240.0138
ASP 10250.0176
THR 10260.0170
GLY 10270.0167
ALA 10280.0153
ASP 10290.0137
ASP 10300.0083
THR 10310.0092
VAL 10320.0088
VAL 10320.0090
LEU 10330.0096
GLU 10340.0138
GLU 10350.0118
MET 10360.0123
MET 10360.0122
ASN 10370.0098
LEU 10380.0064
PRO 10390.0061
GLY 10400.0039
ARG 10410.0074
TRP 10420.0094
LYS 10430.0112
PRO 10440.0136
LYS 10450.0103
MET 10460.0105
ILE 10470.0337
GLY 10480.0989
GLY 10490.0683
ILE 10500.0166
GLY 10510.0458
GLY 10520.0141
PHE 10530.0087
ILE 10540.0491
LYS 10550.0282
VAL 10560.0163
ARG 10570.0101
GLN 10580.0101
TYR 10590.0105
ASP 10600.0163
GLN 10610.0248
ILE 10620.0137
LEU 10630.0146
ILE 10640.0094
ILE 10640.0095
GLU 10650.0095
ILE 10660.0103
CYS 10670.0115
GLY 10680.0153
HIS 10690.0140
LYS 10700.0167
ALA 10710.0144
ILE 10720.0112
GLY 10730.0075
THR 10740.0113
VAL 10750.0095
LEU 10760.0060
VAL 10770.0077
GLY 10780.0065
PRO 10790.0072
THR 10800.0190
PRO 10810.0194
VAL 10820.0193
ASN 10830.0141
ILE 10840.0122
ILE 10840.0122
ILE 10850.0115
GLY 10860.0150
ARG 10870.0175
ASN 10880.0126
LEU 10890.0129
LEU 10900.0156
THR 10910.0153
THR 10910.0153
THR 10910.0154
GLN 10920.0157
ILE 10930.0161
GLY 10940.0136
CYS 10950.0141
THR 10960.0081
LEU 10970.0109
ASN 10980.0077
PHE 10990.0106
PRO 10010.0059
GLN 10020.0045
ILE 10030.0082
THR 10040.0163
LEU 10050.0123
TRP 10060.0253
LYS 10070.0557
LYS 10070.0560
ARG 10080.0190
ARG 10080.0192
PRO 10090.0176
LEU 10100.0211
VAL 10110.0156
THR 10120.0162
ILE 10130.0104
LYS 10140.0106
ILE 10150.0088
GLY 10160.0123
GLY 10170.0328
GLN 10180.0250
LEU 10190.0205
LYS 10200.0202
GLU 10210.0192
GLU 10210.0192
ALA 10220.0162
LEU 10230.0139
LEU 10240.0138
ASP 10250.0176
THR 10260.0170
GLY 10270.0167
ALA 10280.0153
ASP 10290.0137
ASP 10300.0083
THR 10310.0092
VAL 10320.0088
VAL 10320.0090
LEU 10330.0096
GLU 10340.0138
GLU 10350.0118
MET 10360.0123
MET 10360.0122
ASN 10370.0098
LEU 10380.0064
PRO 10390.0061
GLY 10400.0039
ARG 10410.0074
TRP 10420.0094
LYS 10430.0112
PRO 10440.0136
LYS 10450.0103
MET 10460.0105
ILE 10470.0337
GLY 10480.0989
GLY 10490.0683
ILE 10500.0166
GLY 10510.0458
GLY 10520.0141
PHE 10530.0087
ILE 10540.0491
LYS 10550.0282
VAL 10560.0163
ARG 10570.0101
GLN 10580.0101
TYR 10590.0105
ASP 10600.0163
GLN 10610.0248
ILE 10620.0137
LEU 10630.0146
ILE 10640.0094
ILE 10640.0095
GLU 10650.0095
ILE 10660.0103
CYS 10670.0115
GLY 10680.0153
HIS 10690.0140
LYS 10700.0167
ALA 10710.0144
ILE 10720.0112
GLY 10730.0075
THR 10740.0113
VAL 10750.0095
LEU 10760.0060
VAL 10770.0077
GLY 10780.0065
PRO 10790.0072
THR 10800.0190
PRO 10810.0194
VAL 10820.0193
ASN 10830.0141
ILE 10840.0122
ILE 10840.0122
ILE 10850.0115
GLY 10860.0150
ARG 10870.0175
ASN 10880.0126
LEU 10890.0129
LEU 10900.0156
THR 10910.0153
THR 10910.0153
THR 10910.0154
GLN 10920.0157
ILE 10930.0161
GLY 10940.0136
CYS 10950.0141
THR 10960.0081
LEU 10970.0109
ASN 10980.0077
PHE 10990.0106

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.