CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 37  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1367
PRO 10010.0340
GLN 10020.0333
ILE 10030.0225
THR 10040.0220
LEU 10050.0179
TRP 10060.0242
LYS 10070.0329
LYS 10070.0328
ARG 10080.0266
ARG 10080.0266
PRO 10090.0147
LEU 10100.0138
VAL 10110.0037
THR 10120.0071
ILE 10130.0083
LYS 10140.0162
ILE 10150.0076
GLY 10160.0110
GLY 10170.0473
GLN 10180.0285
LEU 10190.0231
LYS 10200.0179
GLU 10210.0145
GLU 10210.0144
ALA 10220.0130
LEU 10230.0129
LEU 10240.0097
ASP 10250.0113
THR 10260.0136
GLY 10270.0156
ALA 10280.0096
ASP 10290.0144
ASP 10300.0132
THR 10310.0136
VAL 10320.0189
VAL 10320.0189
LEU 10330.0170
GLU 10340.0216
GLU 10350.0156
MET 10360.0105
MET 10360.0105
ASN 10370.0069
LEU 10380.0114
PRO 10390.0156
GLY 10400.0299
ARG 10410.0339
TRP 10420.0209
LYS 10430.0277
PRO 10440.0240
LYS 10450.0193
MET 10460.0119
ILE 10470.0307
GLY 10480.0276
GLY 10490.0279
ILE 10500.0298
GLY 10510.1367
GLY 10520.0810
PHE 10530.0439
ILE 10540.0440
LYS 10550.0259
VAL 10560.0223
ARG 10570.0184
GLN 10580.0222
TYR 10590.0197
ASP 10600.0216
GLN 10610.0204
ILE 10620.0121
LEU 10630.0116
ILE 10640.0135
ILE 10640.0136
GLU 10650.0173
ILE 10660.0138
CYS 10670.0201
GLY 10680.0258
HIS 10690.0198
LYS 10700.0166
ALA 10710.0101
ILE 10720.0113
GLY 10730.0183
THR 10740.0199
VAL 10750.0177
LEU 10760.0208
VAL 10770.0193
GLY 10780.0186
PRO 10790.0229
THR 10800.0271
PRO 10810.0465
VAL 10820.0251
ASN 10830.0179
ILE 10840.0147
ILE 10840.0147
ILE 10850.0099
GLY 10860.0074
ARG 10870.0090
ASN 10880.0075
LEU 10890.0076
LEU 10900.0042
THR 10910.0097
THR 10910.0097
THR 10910.0097
GLN 10920.0088
ILE 10930.0072
GLY 10940.0099
CYS 10950.0135
THR 10960.0225
LEU 10970.0218
ASN 10980.0274
PHE 10990.0211
PRO 10010.0340
GLN 10020.0333
ILE 10030.0225
THR 10040.0220
LEU 10050.0179
TRP 10060.0242
LYS 10070.0329
LYS 10070.0328
ARG 10080.0266
ARG 10080.0266
PRO 10090.0147
LEU 10100.0138
VAL 10110.0037
THR 10120.0071
ILE 10130.0083
LYS 10140.0162
ILE 10150.0076
GLY 10160.0110
GLY 10170.0473
GLN 10180.0285
LEU 10190.0231
LYS 10200.0179
GLU 10210.0145
GLU 10210.0144
ALA 10220.0130
LEU 10230.0129
LEU 10240.0097
ASP 10250.0113
THR 10260.0136
GLY 10270.0156
ALA 10280.0096
ASP 10290.0144
ASP 10300.0132
THR 10310.0136
VAL 10320.0189
VAL 10320.0189
LEU 10330.0170
GLU 10340.0216
GLU 10350.0156
MET 10360.0105
MET 10360.0105
ASN 10370.0069
LEU 10380.0114
PRO 10390.0156
GLY 10400.0299
ARG 10410.0339
TRP 10420.0209
LYS 10430.0277
PRO 10440.0240
LYS 10450.0193
MET 10460.0119
ILE 10470.0307
GLY 10480.0276
GLY 10490.0279
ILE 10500.0298
GLY 10510.1367
GLY 10520.0810
PHE 10530.0439
ILE 10540.0440
LYS 10550.0259
VAL 10560.0223
ARG 10570.0184
GLN 10580.0222
TYR 10590.0197
ASP 10600.0216
GLN 10610.0204
ILE 10620.0121
LEU 10630.0116
ILE 10640.0135
ILE 10640.0136
GLU 10650.0173
ILE 10660.0138
CYS 10670.0201
GLY 10680.0258
HIS 10690.0198
LYS 10700.0166
ALA 10710.0101
ILE 10720.0113
GLY 10730.0183
THR 10740.0199
VAL 10750.0177
LEU 10760.0208
VAL 10770.0193
GLY 10780.0186
PRO 10790.0229
THR 10800.0271
PRO 10810.0465
VAL 10820.0251
ASN 10830.0179
ILE 10840.0147
ILE 10840.0147
ILE 10850.0099
GLY 10860.0074
ARG 10870.0090
ASN 10880.0075
LEU 10890.0076
LEU 10900.0042
THR 10910.0097
THR 10910.0097
THR 10910.0097
GLN 10920.0088
ILE 10930.0072
GLY 10940.0099
CYS 10950.0135
THR 10960.0225
LEU 10970.0218
ASN 10980.0274
PHE 10990.0211

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.