CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1634
PRO 10010.0100
GLN 10020.0126
ILE 10030.0150
THR 10040.0297
LEU 10050.0234
TRP 10060.0262
LYS 10070.0228
LYS 10070.0235
ARG 10080.0208
ARG 10080.0209
PRO 10090.0204
LEU 10100.0267
VAL 10110.0315
THR 10120.0358
ILE 10130.0204
LYS 10140.0168
ILE 10150.0120
GLY 10160.0193
GLY 10170.0456
GLN 10180.0360
LEU 10190.0398
LYS 10200.0277
GLU 10210.0292
GLU 10210.0292
ALA 10220.0143
LEU 10230.0117
LEU 10240.0101
ASP 10250.0121
THR 10260.0121
GLY 10270.0115
ALA 10280.0110
ASP 10290.0109
ASP 10300.0108
THR 10310.0125
VAL 10320.0095
VAL 10320.0096
LEU 10330.0043
GLU 10340.0078
GLU 10350.0102
MET 10360.0122
MET 10360.0122
ASN 10370.0210
LEU 10380.0048
PRO 10390.0073
GLY 10400.0125
ARG 10410.0129
TRP 10420.0099
LYS 10430.0167
PRO 10440.0278
LYS 10450.0246
MET 10460.0295
ILE 10470.0247
GLY 10480.0532
GLY 10490.0343
ILE 10500.0309
GLY 10510.1634
GLY 10520.0680
PHE 10530.0108
ILE 10540.0211
LYS 10550.0312
VAL 10560.0199
ARG 10570.0107
GLN 10580.0079
TYR 10590.0086
ASP 10600.0107
GLN 10610.0263
ILE 10620.0149
LEU 10630.0202
ILE 10640.0119
ILE 10640.0119
GLU 10650.0139
ILE 10660.0149
CYS 10670.0225
GLY 10680.0309
HIS 10690.0226
LYS 10700.0243
ALA 10710.0235
ILE 10720.0199
GLY 10730.0158
THR 10740.0110
VAL 10750.0099
LEU 10760.0072
VAL 10770.0070
GLY 10780.0129
PRO 10790.0245
THR 10800.0162
PRO 10810.0283
VAL 10820.0127
ASN 10830.0074
ILE 10840.0109
ILE 10840.0108
ILE 10850.0098
GLY 10860.0119
ARG 10870.0170
ASN 10880.0188
LEU 10890.0190
LEU 10900.0185
THR 10910.0265
THR 10910.0264
THR 10910.0263
GLN 10920.0261
ILE 10930.0160
GLY 10940.0182
CYS 10950.0173
THR 10960.0143
LEU 10970.0095
ASN 10980.0111
PHE 10990.0075
PRO 10010.0100
GLN 10020.0126
ILE 10030.0150
THR 10040.0297
LEU 10050.0234
TRP 10060.0262
LYS 10070.0228
LYS 10070.0235
ARG 10080.0208
ARG 10080.0209
PRO 10090.0204
LEU 10100.0267
VAL 10110.0315
THR 10120.0358
ILE 10130.0204
LYS 10140.0168
ILE 10150.0120
GLY 10160.0193
GLY 10170.0456
GLN 10180.0360
LEU 10190.0398
LYS 10200.0277
GLU 10210.0292
GLU 10210.0292
ALA 10220.0143
LEU 10230.0117
LEU 10240.0101
ASP 10250.0121
THR 10260.0121
GLY 10270.0115
ALA 10280.0110
ASP 10290.0109
ASP 10300.0108
THR 10310.0125
VAL 10320.0095
VAL 10320.0096
LEU 10330.0043
GLU 10340.0078
GLU 10350.0102
MET 10360.0122
MET 10360.0122
ASN 10370.0210
LEU 10380.0048
PRO 10390.0073
GLY 10400.0125
ARG 10410.0129
TRP 10420.0099
LYS 10430.0167
PRO 10440.0278
LYS 10450.0246
MET 10460.0295
ILE 10470.0247
GLY 10480.0532
GLY 10490.0343
ILE 10500.0309
GLY 10510.1634
GLY 10520.0680
PHE 10530.0108
ILE 10540.0211
LYS 10550.0312
VAL 10560.0199
ARG 10570.0107
GLN 10580.0079
TYR 10590.0086
ASP 10600.0107
GLN 10610.0263
ILE 10620.0149
LEU 10630.0202
ILE 10640.0119
ILE 10640.0119
GLU 10650.0139
ILE 10660.0149
CYS 10670.0225
GLY 10680.0309
HIS 10690.0226
LYS 10700.0243
ALA 10710.0235
ILE 10720.0199
GLY 10730.0158
THR 10740.0110
VAL 10750.0099
LEU 10760.0072
VAL 10770.0070
GLY 10780.0129
PRO 10790.0245
THR 10800.0162
PRO 10810.0283
VAL 10820.0127
ASN 10830.0074
ILE 10840.0109
ILE 10840.0108
ILE 10850.0098
GLY 10860.0119
ARG 10870.0170
ASN 10880.0188
LEU 10890.0190
LEU 10900.0185
THR 10910.0265
THR 10910.0264
THR 10910.0263
GLN 10920.0261
ILE 10930.0160
GLY 10940.0182
CYS 10950.0173
THR 10960.0143
LEU 10970.0095
ASN 10980.0111
PHE 10990.0075

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.